Gene : Glyma.20G019400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11353:SF99 - CHAPERONIN 60 SUBUNIT ALPHA 2, CHLOROPLASTIC Genomic Order:  194
Name:  ? Glyma.20G019400 Secondary Identifier:  ? PAC:30520377
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G019400 0.5kb upstream 0.5kb upstream 8498 true Chr20: 2029127-2037624 Glycine max
Glyma.20G019400 0.5kb upstream 0.5kb upstream 500 false Chr20: 2037125-2037624 Glycine max
Glyma.20G019400 0.5kb downstream 0.5kb downstream 8498 true Chr20: 2028627-2037124 Glycine max
Glyma.20G019400 0.5kb downstream 0.5kb downstream 500 false Chr20: 2028627-2029126 Glycine max
Glyma.20G019400 1.0kb upstream 1.0kb upstream 8998 true Chr20: 2029127-2038124 Glycine max
Glyma.20G019400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2037125-2038124 Glycine max
Glyma.20G019400 1.0kb downstream 1.0kb downstream 8998 true Chr20: 2028127-2037124 Glycine max
Glyma.20G019400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2028127-2029126 Glycine max
Glyma.20G019400 2.0kb upstream 2.0kb upstream 9998 true Chr20: 2029127-2039124 Glycine max
Glyma.20G019400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2037125-2039124 Glycine max
Glyma.20G019400 2.0kb downstream 2.0kb downstream 9998 true Chr20: 2027127-2037124 Glycine max
Glyma.20G019400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2027127-2029126 Glycine max
Glyma.20G019400 5.0kb upstream 5.0kb upstream 12998 true Chr20: 2029127-2042124 Glycine max
Glyma.20G019400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2037125-2042124 Glycine max
Glyma.20G019400 5.0kb downstream 5.0kb downstream 12998 true Chr20: 2024127-2037124 Glycine max
Glyma.20G019400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2024127-2029126 Glycine max
Glyma.20G019400 10.0kb upstream 10.0kb upstream 17998 true Chr20: 2029127-2047124 Glycine max
Glyma.20G019400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2037125-2047124 Glycine max
Glyma.20G019400 10.0kb downstream 10.0kb downstream 17998 true Chr20: 2019127-2037124 Glycine max
Glyma.20G019400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2019127-2029126 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302563 5265 Fabidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0578 0.0 14.9456   High
cufflinks 1.64634 0.0 7.26742    
cufflinks 1.37533 0.0 6.34452    
cufflinks 1.4082 0.0 6.4967    
cufflinks 1.38431 0.0 6.46281    
cufflinks 1.27308 0.0 11.1546    
cufflinks 1.30595 0.0 4.79191    
cufflinks 1.59443 0.0 7.06772    
cufflinks 1.64238 0.0 7.23949    
cufflinks 0.082     Low  
cufflinks 0.041     Low Low
cufflinks 0.192        
cufflinks 0.143        
cufflinks 0.137        
cufflinks 0.135        
cufflinks 0.168        
cufflinks 0.073        
cufflinks 0.156        
cufflinks 0.205        
cufflinks 0.179        
cufflinks 0.06     Low Low
cufflinks 0.195        
cufflinks 0.212       High
cufflinks 0.073        
cufflinks 0.19        
cufflinks 0.052     Low Low

0 Strain