Gene : Glyma.20G019600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11715//PTHR11715:SF9 - GLYCINE CLEAVAGE SYSTEM H PROTEIN Genomic Order:  196
Name:  ? Glyma.20G019600 Secondary Identifier:  ? PAC:30522498
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G019600 0.5kb upstream 0.5kb upstream 3738 true Chr20: 2042718-2046455 Glycine max
Glyma.20G019600 0.5kb upstream 0.5kb upstream 500 false Chr20: 2045956-2046455 Glycine max
Glyma.20G019600 0.5kb downstream 0.5kb downstream 3738 true Chr20: 2042218-2045955 Glycine max
Glyma.20G019600 0.5kb downstream 0.5kb downstream 500 false Chr20: 2042218-2042717 Glycine max
Glyma.20G019600 1.0kb upstream 1.0kb upstream 4238 true Chr20: 2042718-2046955 Glycine max
Glyma.20G019600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2045956-2046955 Glycine max
Glyma.20G019600 1.0kb downstream 1.0kb downstream 4238 true Chr20: 2041718-2045955 Glycine max
Glyma.20G019600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2041718-2042717 Glycine max
Glyma.20G019600 2.0kb upstream 2.0kb upstream 5238 true Chr20: 2042718-2047955 Glycine max
Glyma.20G019600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2045956-2047955 Glycine max
Glyma.20G019600 2.0kb downstream 2.0kb downstream 5238 true Chr20: 2040718-2045955 Glycine max
Glyma.20G019600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2040718-2042717 Glycine max
Glyma.20G019600 5.0kb upstream 5.0kb upstream 8238 true Chr20: 2042718-2050955 Glycine max
Glyma.20G019600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2045956-2050955 Glycine max
Glyma.20G019600 5.0kb downstream 5.0kb downstream 8238 true Chr20: 2037718-2045955 Glycine max
Glyma.20G019600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2037718-2042717 Glycine max
Glyma.20G019600 10.0kb upstream 10.0kb upstream 13238 true Chr20: 2042718-2055955 Glycine max
Glyma.20G019600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2045956-2055955 Glycine max
Glyma.20G019600 10.0kb downstream 10.0kb downstream 13238 true Chr20: 2032718-2045955 Glycine max
Glyma.20G019600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2032718-2042717 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314800 5265 Fabidae View MSA
124062374 5270 Rosid View MSA
123736727 5271 Pentapetalae View MSA
122785842 5272 Eudicot View MSA
122045922 5273 Angiosperm View MSA
121349488 5274 Embryophyte View MSA
123424429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7861 0.0 44.4839   Low
cufflinks 68.9879 0.0 186.043 High  
cufflinks 35.0285 0.0 93.631 High  
cufflinks 89.4386 0.0 245.202 High  
cufflinks 105.16 0.0 291.7 High  
cufflinks 99.6829 0.0 275.688 High  
cufflinks 31.1427 0.0 83.6989 High  
cufflinks 161.545 0.0 473.649 High High
cufflinks 146.013 0.0 421.397 High  
cufflinks 46.623     High High
cufflinks 1.891       Low
cufflinks 7.143        
cufflinks 27.98     High High
cufflinks 39.017     High High
cufflinks 6.629     High  
cufflinks 5.21        
cufflinks 6.88     High  
cufflinks 11.936     High  
cufflinks 14.453     High  
cufflinks 4.481        
cufflinks 3.211       Low
cufflinks 5.541        
cufflinks 6.655        
cufflinks 3.947        
cufflinks 5.458        
cufflinks 4.946        

0 Strain