Gene : Glyma.20G019700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11715//PTHR11715:SF9 - GLYCINE CLEAVAGE SYSTEM H PROTEIN Genomic Order:  197
Name:  ? Glyma.20G019700 Secondary Identifier:  ? PAC:30521615
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G019700 0.5kb upstream 0.5kb upstream 4343 true Chr20: 2047020-2051362 Glycine max
Glyma.20G019700 0.5kb upstream 0.5kb upstream 500 false Chr20: 2050863-2051362 Glycine max
Glyma.20G019700 0.5kb downstream 0.5kb downstream 4343 true Chr20: 2046520-2050862 Glycine max
Glyma.20G019700 0.5kb downstream 0.5kb downstream 500 false Chr20: 2046520-2047019 Glycine max
Glyma.20G019700 1.0kb upstream 1.0kb upstream 4843 true Chr20: 2047020-2051862 Glycine max
Glyma.20G019700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2050863-2051862 Glycine max
Glyma.20G019700 1.0kb downstream 1.0kb downstream 4843 true Chr20: 2046020-2050862 Glycine max
Glyma.20G019700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2046020-2047019 Glycine max
Glyma.20G019700 2.0kb upstream 2.0kb upstream 5843 true Chr20: 2047020-2052862 Glycine max
Glyma.20G019700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2050863-2052862 Glycine max
Glyma.20G019700 2.0kb downstream 2.0kb downstream 5843 true Chr20: 2045020-2050862 Glycine max
Glyma.20G019700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2045020-2047019 Glycine max
Glyma.20G019700 5.0kb upstream 5.0kb upstream 8843 true Chr20: 2047020-2055862 Glycine max
Glyma.20G019700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2050863-2055862 Glycine max
Glyma.20G019700 5.0kb downstream 5.0kb downstream 8843 true Chr20: 2042020-2050862 Glycine max
Glyma.20G019700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2042020-2047019 Glycine max
Glyma.20G019700 10.0kb upstream 10.0kb upstream 13843 true Chr20: 2047020-2060862 Glycine max
Glyma.20G019700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2050863-2060862 Glycine max
Glyma.20G019700 10.0kb downstream 10.0kb downstream 13843 true Chr20: 2037020-2050862 Glycine max
Glyma.20G019700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2037020-2047019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314800 5265 Fabidae View MSA
124062374 5270 Rosid View MSA
123736727 5271 Pentapetalae View MSA
122785842 5272 Eudicot View MSA
122045922 5273 Angiosperm View MSA
121349488 5274 Embryophyte View MSA
123424429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.29263 0.0 19.4915   Low
cufflinks 25.7821 0.0 69.2168 High  
cufflinks 8.70446 0.0 25.6142   Low
cufflinks 23.3722 0.0 62.9856 High  
cufflinks 42.7525 0.0 114.162 High  
cufflinks 30.9671 0.0 82.7382 High  
cufflinks 29.4038 0.0 78.7148 High  
cufflinks 23.3765 0.0 62.9758 High  
cufflinks 43.8162 0.0 117.08 High High
cufflinks 8.746     High High
cufflinks 1.176       Low
cufflinks 4.637        
cufflinks 14.068     High High
cufflinks 22.666     High High
cufflinks 5.279     High  
cufflinks 1.848        
cufflinks 2.6        
cufflinks 6.606        
cufflinks 8.061     High  
cufflinks 1.275       Low
cufflinks 2.097        
cufflinks 1.499        
cufflinks 2.184        
cufflinks 1.055       Low
cufflinks 1.625        
cufflinks 2.642        

0 Strain