Gene : Glyma.20G011700 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR24078:SF279 - DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  117
Name:  ? Glyma.20G011700 Secondary Identifier:  ? PAC:30522007
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G011700 0.5kb upstream 0.5kb upstream 11172 true Chr20: 974511-985682 Glycine max
Glyma.20G011700 0.5kb upstream 0.5kb upstream 500 false Chr20: 985183-985682 Glycine max
Glyma.20G011700 0.5kb downstream 0.5kb downstream 11172 true Chr20: 974011-985182 Glycine max
Glyma.20G011700 0.5kb downstream 0.5kb downstream 500 false Chr20: 974011-974510 Glycine max
Glyma.20G011700 1.0kb upstream 1.0kb upstream 11672 true Chr20: 974511-986182 Glycine max
Glyma.20G011700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 985183-986182 Glycine max
Glyma.20G011700 1.0kb downstream 1.0kb downstream 11672 true Chr20: 973511-985182 Glycine max
Glyma.20G011700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 973511-974510 Glycine max
Glyma.20G011700 2.0kb upstream 2.0kb upstream 12672 true Chr20: 974511-987182 Glycine max
Glyma.20G011700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 985183-987182 Glycine max
Glyma.20G011700 2.0kb downstream 2.0kb downstream 12672 true Chr20: 972511-985182 Glycine max
Glyma.20G011700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 972511-974510 Glycine max
Glyma.20G011700 5.0kb upstream 5.0kb upstream 15672 true Chr20: 974511-990182 Glycine max
Glyma.20G011700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 985183-990182 Glycine max
Glyma.20G011700 5.0kb downstream 5.0kb downstream 15672 true Chr20: 969511-985182 Glycine max
Glyma.20G011700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 969511-974510 Glycine max
Glyma.20G011700 10.0kb upstream 10.0kb upstream 20672 true Chr20: 974511-995182 Glycine max
Glyma.20G011700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 985183-995182 Glycine max
Glyma.20G011700 10.0kb downstream 10.0kb downstream 20672 true Chr20: 964511-985182 Glycine max
Glyma.20G011700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 964511-974510 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311252 5265 Fabidae View MSA
124061901 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.63953 0.0 10.4286    
cufflinks 7.90926 0.0 29.6549   High
cufflinks 2.65042 0.0 13.2081    
cufflinks 4.85044 0.0 20.8201    
cufflinks 2.73448 0.0 10.8688    
cufflinks 2.62902 0.0 10.2378    
cufflinks 1.88043 0.0 10.0686   Low
cufflinks 4.69885 0.0 19.0559    
cufflinks 4.04185 0.0 17.0456    
cufflinks 0.217        
cufflinks 0.036     Low Low
cufflinks 0.386        
cufflinks 0.186        
cufflinks 0.196        
cufflinks 0.088        
cufflinks 0.441        
cufflinks 0.068     Low Low
cufflinks 0.468       High
cufflinks 0.48       High
cufflinks 0.383        
cufflinks 0.059     Low Low
cufflinks 0.427        
cufflinks 0.385        
cufflinks 0.059     Low Low
cufflinks 0.374        
cufflinks 0.048     Low Low

0 Strain