Gene : Glyma.20G012500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10106//PTHR10106:SF19 - CYTOCHROME B561-RELATED Genomic Order:  125
Name:  ? Glyma.20G012500 Secondary Identifier:  ? PAC:30519458
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G012500 0.5kb upstream 0.5kb upstream 2378 true Chr20: 1055308-1057685 Glycine max
Glyma.20G012500 0.5kb upstream 0.5kb upstream 500 false Chr20: 1055308-1055807 Glycine max
Glyma.20G012500 0.5kb downstream 0.5kb downstream 2378 true Chr20: 1055808-1058185 Glycine max
Glyma.20G012500 0.5kb downstream 0.5kb downstream 500 false Chr20: 1057686-1058185 Glycine max
Glyma.20G012500 1.0kb upstream 1.0kb upstream 2878 true Chr20: 1054808-1057685 Glycine max
Glyma.20G012500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 1054808-1055807 Glycine max
Glyma.20G012500 1.0kb downstream 1.0kb downstream 2878 true Chr20: 1055808-1058685 Glycine max
Glyma.20G012500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 1057686-1058685 Glycine max
Glyma.20G012500 2.0kb upstream 2.0kb upstream 3878 true Chr20: 1053808-1057685 Glycine max
Glyma.20G012500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 1053808-1055807 Glycine max
Glyma.20G012500 2.0kb downstream 2.0kb downstream 3878 true Chr20: 1055808-1059685 Glycine max
Glyma.20G012500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 1057686-1059685 Glycine max
Glyma.20G012500 5.0kb upstream 5.0kb upstream 6878 true Chr20: 1050808-1057685 Glycine max
Glyma.20G012500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 1050808-1055807 Glycine max
Glyma.20G012500 5.0kb downstream 5.0kb downstream 6878 true Chr20: 1055808-1062685 Glycine max
Glyma.20G012500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 1057686-1062685 Glycine max
Glyma.20G012500 10.0kb upstream 10.0kb upstream 11878 true Chr20: 1045808-1057685 Glycine max
Glyma.20G012500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 1045808-1055807 Glycine max
Glyma.20G012500 10.0kb downstream 10.0kb downstream 11878 true Chr20: 1055808-1067685 Glycine max
Glyma.20G012500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 1057686-1067685 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306725 5265 Fabidae View MSA
124070141 5270 Rosid View MSA
123742556 5271 Pentapetalae View MSA
122794187 5272 Eudicot View MSA
122048589 5273 Angiosperm View MSA
123429174 5275 Viridiplantae View MSA
121311029 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0742761 0.0 0.316527 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.156256 0.0 0.633455 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.155275 0.0 0.630781 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.217187 0.0 0.869508 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.387        
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.612        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.149        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.858       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.311        

0 Strain