Gene : Glyma.20G004400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22883:SF35 - PALMITOYLTRANSFERASE ZDHHC6 Genomic Order:  44
Name:  ? Glyma.20G004400 Secondary Identifier:  ? PAC:30521311
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G004400 0.5kb upstream 0.5kb upstream 8116 true Chr20: 435119-443234 Glycine max
Glyma.20G004400 0.5kb upstream 0.5kb upstream 500 false Chr20: 435119-435618 Glycine max
Glyma.20G004400 0.5kb downstream 0.5kb downstream 8116 true Chr20: 435619-443734 Glycine max
Glyma.20G004400 0.5kb downstream 0.5kb downstream 500 false Chr20: 443235-443734 Glycine max
Glyma.20G004400 1.0kb upstream 1.0kb upstream 8616 true Chr20: 434619-443234 Glycine max
Glyma.20G004400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 434619-435618 Glycine max
Glyma.20G004400 1.0kb downstream 1.0kb downstream 8616 true Chr20: 435619-444234 Glycine max
Glyma.20G004400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 443235-444234 Glycine max
Glyma.20G004400 2.0kb upstream 2.0kb upstream 9616 true Chr20: 433619-443234 Glycine max
Glyma.20G004400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 433619-435618 Glycine max
Glyma.20G004400 2.0kb downstream 2.0kb downstream 9616 true Chr20: 435619-445234 Glycine max
Glyma.20G004400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 443235-445234 Glycine max
Glyma.20G004400 5.0kb upstream 5.0kb upstream 12616 true Chr20: 430619-443234 Glycine max
Glyma.20G004400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 430619-435618 Glycine max
Glyma.20G004400 5.0kb downstream 5.0kb downstream 12616 true Chr20: 435619-448234 Glycine max
Glyma.20G004400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 443235-448234 Glycine max
Glyma.20G004400 10.0kb upstream 10.0kb upstream 17616 true Chr20: 425619-443234 Glycine max
Glyma.20G004400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 425619-435618 Glycine max
Glyma.20G004400 10.0kb downstream 10.0kb downstream 17616 true Chr20: 435619-453234 Glycine max
Glyma.20G004400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 443235-453234 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315342 5265 Fabidae View MSA
124074562 5270 Rosid View MSA
123740420 5271 Pentapetalae View MSA
122789701 5272 Eudicot View MSA
122042065 5273 Angiosperm View MSA
121349968 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10599 0.0 14.7315    
cufflinks 1.27558 0.0 8.35694    
cufflinks 1.56309 0.0 11.5248    
cufflinks 1.03358 0.0 7.5145    
cufflinks 1.32909 0.0 12.7893    
cufflinks 2.78818 0.0 14.7089   High
cufflinks 0.541347 0.0 3.55145   Low
cufflinks 1.30125 0.0 10.619    
cufflinks 2.08664 0.0 10.5875    
cufflinks 0.034     Low Low
cufflinks 0.056        
cufflinks 0.106     Low  
cufflinks 0.087     Low  
cufflinks 0.059     Low  
cufflinks 0.044     Low Low
cufflinks 0.078     Low  
cufflinks 0.076        
cufflinks 0.113     Low  
cufflinks 0.104        
cufflinks 0.116        
cufflinks 0.056     Low  
cufflinks 0.126       High
cufflinks 0.128       High
cufflinks 0.096        
cufflinks 0.107        
cufflinks 0.059     Low  

0 Strain