Gene : Glyma.20G005200 G. max Wm82.a2.v1
Defline:  (1 of 8) PF12579 - Protein of unknown function (DUF3755) (DUF3755) Genomic Order:  52
Name:  ? Glyma.20G005200 Secondary Identifier:  ? PAC:30523433
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G005200 0.5kb upstream 0.5kb upstream 7845 true Chr20: 494584-502428 Glycine max
Glyma.20G005200 0.5kb upstream 0.5kb upstream 500 false Chr20: 501929-502428 Glycine max
Glyma.20G005200 0.5kb downstream 0.5kb downstream 7845 true Chr20: 494084-501928 Glycine max
Glyma.20G005200 0.5kb downstream 0.5kb downstream 500 false Chr20: 494084-494583 Glycine max
Glyma.20G005200 1.0kb upstream 1.0kb upstream 8345 true Chr20: 494584-502928 Glycine max
Glyma.20G005200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 501929-502928 Glycine max
Glyma.20G005200 1.0kb downstream 1.0kb downstream 8345 true Chr20: 493584-501928 Glycine max
Glyma.20G005200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 493584-494583 Glycine max
Glyma.20G005200 2.0kb upstream 2.0kb upstream 9345 true Chr20: 494584-503928 Glycine max
Glyma.20G005200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 501929-503928 Glycine max
Glyma.20G005200 2.0kb downstream 2.0kb downstream 9345 true Chr20: 492584-501928 Glycine max
Glyma.20G005200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 492584-494583 Glycine max
Glyma.20G005200 5.0kb upstream 5.0kb upstream 12345 true Chr20: 494584-506928 Glycine max
Glyma.20G005200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 501929-506928 Glycine max
Glyma.20G005200 5.0kb downstream 5.0kb downstream 12345 true Chr20: 489584-501928 Glycine max
Glyma.20G005200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 489584-494583 Glycine max
Glyma.20G005200 10.0kb upstream 10.0kb upstream 17345 true Chr20: 494584-511928 Glycine max
Glyma.20G005200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 501929-511928 Glycine max
Glyma.20G005200 10.0kb downstream 10.0kb downstream 17345 true Chr20: 484584-501928 Glycine max
Glyma.20G005200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 484584-494583 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297993 5265 Fabidae View MSA
124060862 5270 Rosid View MSA
123751212 5271 Pentapetalae View MSA
122789009 5272 Eudicot View MSA
122047918 5273 Angiosperm View MSA
121349043 5274 Embryophyte View MSA
123381139 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.93385 0.0 29.2234    
cufflinks 16.5112 0.0 62.6944   High
cufflinks 4.43057 0.0 19.0087    
cufflinks 5.94149 0.0 23.053    
cufflinks 4.99004 0.0 20.6443    
cufflinks 2.18287 0.0 11.6888   Low
cufflinks 12.1339 0.0 47.0685   High
cufflinks 9.60306 0.0 37.9752    
cufflinks 3.79418 0.0 17.0647    
cufflinks 1.1        
cufflinks 0.08       Low
cufflinks 0.512        
cufflinks 0.237        
cufflinks 0.206        
cufflinks 0.135        
cufflinks 1.367        
cufflinks 0.233        
cufflinks 0.728        
cufflinks 1.63       High
cufflinks 1.828       High
cufflinks 0.108       Low
cufflinks 1.631       High
cufflinks 1.383        
cufflinks 0.078       Low
cufflinks 1.853       High
cufflinks 0.139        

0 Strain