Gene : Glyma.20G050300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11695:SF492 - ALCOHOL DEHYDROGENASE-LIKE 1-RELATED Genomic Order:  503
Name:  ? Glyma.20G050300 Secondary Identifier:  ? PAC:30522131
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5486 Glycine max pathologic  
Gmax PWY-6333 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  
Gmax PWY-6802 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G050300 0.5kb upstream 0.5kb upstream 15696 true Chr20: 10226320-10242015 Glycine max
Glyma.20G050300 0.5kb upstream 0.5kb upstream 500 false Chr20: 10241516-10242015 Glycine max
Glyma.20G050300 0.5kb downstream 0.5kb downstream 15696 true Chr20: 10225820-10241515 Glycine max
Glyma.20G050300 0.5kb downstream 0.5kb downstream 500 false Chr20: 10225820-10226319 Glycine max
Glyma.20G050300 1.0kb upstream 1.0kb upstream 16196 true Chr20: 10226320-10242515 Glycine max
Glyma.20G050300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 10241516-10242515 Glycine max
Glyma.20G050300 1.0kb downstream 1.0kb downstream 16196 true Chr20: 10225320-10241515 Glycine max
Glyma.20G050300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 10225320-10226319 Glycine max
Glyma.20G050300 2.0kb upstream 2.0kb upstream 17196 true Chr20: 10226320-10243515 Glycine max
Glyma.20G050300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 10241516-10243515 Glycine max
Glyma.20G050300 2.0kb downstream 2.0kb downstream 17196 true Chr20: 10224320-10241515 Glycine max
Glyma.20G050300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 10224320-10226319 Glycine max
Glyma.20G050300 5.0kb upstream 5.0kb upstream 20196 true Chr20: 10226320-10246515 Glycine max
Glyma.20G050300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 10241516-10246515 Glycine max
Glyma.20G050300 5.0kb downstream 5.0kb downstream 20196 true Chr20: 10221320-10241515 Glycine max
Glyma.20G050300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 10221320-10226319 Glycine max
Glyma.20G050300 10.0kb upstream 10.0kb upstream 25196 true Chr20: 10226320-10251515 Glycine max
Glyma.20G050300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 10241516-10251515 Glycine max
Glyma.20G050300 10.0kb downstream 10.0kb downstream 25196 true Chr20: 10216320-10241515 Glycine max
Glyma.20G050300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 10216320-10226319 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310727 5265 Fabidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.46458 0.0 39.3447    
cufflinks 12.6795 0.0 69.2263   High
cufflinks 3.36196 0.0 19.6553   Low
cufflinks 2.66438 0.0 16.5584   Low
cufflinks 10.1481 0.0 50.842    
cufflinks 4.43916 0.0 22.681    
cufflinks 4.80586 0.0 26.8185    
cufflinks 8.03432 0.0 33.9492    
cufflinks 6.26014 0.0 39.2249    
cufflinks 0.243        
cufflinks 0.025     Low Low
cufflinks 0.187        
cufflinks 0.355       High
cufflinks 0.431       High
cufflinks 0.04     Low Low
cufflinks 0.179        
cufflinks 0.072        
cufflinks 0.26        
cufflinks 0.461       High
cufflinks 0.134        
cufflinks 0.032     Low Low
cufflinks 0.146        
cufflinks 0.216        
cufflinks 0.04     Low Low
cufflinks 0.152        
cufflinks 0.051     Low  

0 Strain