Gene : Glyma.20G051900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11709:SF97 - ASCORBATE OXIDASE-LIKE PROTEIN-RELATED Genomic Order:  519
Name:  ? Glyma.20G051900 Secondary Identifier:  ? PAC:30520283
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G051900 0.5kb upstream 0.5kb upstream 8595 true Chr20: 11769051-11777645 Glycine max
Glyma.20G051900 0.5kb upstream 0.5kb upstream 500 false Chr20: 11777146-11777645 Glycine max
Glyma.20G051900 0.5kb downstream 0.5kb downstream 8595 true Chr20: 11768551-11777145 Glycine max
Glyma.20G051900 0.5kb downstream 0.5kb downstream 500 false Chr20: 11768551-11769050 Glycine max
Glyma.20G051900 1.0kb upstream 1.0kb upstream 9095 true Chr20: 11769051-11778145 Glycine max
Glyma.20G051900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 11777146-11778145 Glycine max
Glyma.20G051900 1.0kb downstream 1.0kb downstream 9095 true Chr20: 11768051-11777145 Glycine max
Glyma.20G051900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 11768051-11769050 Glycine max
Glyma.20G051900 2.0kb upstream 2.0kb upstream 10095 true Chr20: 11769051-11779145 Glycine max
Glyma.20G051900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 11777146-11779145 Glycine max
Glyma.20G051900 2.0kb downstream 2.0kb downstream 10095 true Chr20: 11767051-11777145 Glycine max
Glyma.20G051900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 11767051-11769050 Glycine max
Glyma.20G051900 5.0kb upstream 5.0kb upstream 13095 true Chr20: 11769051-11782145 Glycine max
Glyma.20G051900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 11777146-11782145 Glycine max
Glyma.20G051900 5.0kb downstream 5.0kb downstream 13095 true Chr20: 11764051-11777145 Glycine max
Glyma.20G051900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 11764051-11769050 Glycine max
Glyma.20G051900 10.0kb upstream 10.0kb upstream 18095 true Chr20: 11769051-11787145 Glycine max
Glyma.20G051900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 11777146-11787145 Glycine max
Glyma.20G051900 10.0kb downstream 10.0kb downstream 18095 true Chr20: 11759051-11777145 Glycine max
Glyma.20G051900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 11759051-11769050 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304662 5265 Fabidae View MSA
124063404 5270 Rosid View MSA
123739714 5271 Pentapetalae View MSA
122791263 5272 Eudicot View MSA
122042920 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0364 0.0 36.1506    
cufflinks 13.4911 0.0 40.3654    
cufflinks 2.54582 0.0 10.7993   Low
cufflinks 32.4665 0.0 123.164 High  
cufflinks 67.1496 0.0 305.849 High  
cufflinks 93.6487 0.0 315.392 High High
cufflinks 44.211 0.0 176.542 High  
cufflinks 48.5074 0.0 201.318 High  
cufflinks 30.2764 0.0 112.031 High  
cufflinks 16.885     High High
cufflinks 0.429       Low
cufflinks 1.104        
cufflinks 10.964     High High
cufflinks 11.036     High High
cufflinks 0.337       Low
cufflinks 1.432        
cufflinks 8.611     High High
cufflinks 1.453        
cufflinks 1.355        
cufflinks 1.166        
cufflinks 0.752        
cufflinks 1.492        
cufflinks 3.084        
cufflinks 0.466       Low
cufflinks 1.23        
cufflinks 3.49        

0 Strain