Gene : Glyma.20G052500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Genomic Order:  525
Name:  ? Glyma.20G052500 Secondary Identifier:  ? PAC:30520041
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G052500 0.5kb upstream 0.5kb upstream 9291 true Chr20: 11866398-11875688 Glycine max
Glyma.20G052500 0.5kb upstream 0.5kb upstream 500 false Chr20: 11866398-11866897 Glycine max
Glyma.20G052500 0.5kb downstream 0.5kb downstream 9291 true Chr20: 11866898-11876188 Glycine max
Glyma.20G052500 0.5kb downstream 0.5kb downstream 500 false Chr20: 11875689-11876188 Glycine max
Glyma.20G052500 1.0kb upstream 1.0kb upstream 9791 true Chr20: 11865898-11875688 Glycine max
Glyma.20G052500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 11865898-11866897 Glycine max
Glyma.20G052500 1.0kb downstream 1.0kb downstream 9791 true Chr20: 11866898-11876688 Glycine max
Glyma.20G052500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 11875689-11876688 Glycine max
Glyma.20G052500 2.0kb upstream 2.0kb upstream 10791 true Chr20: 11864898-11875688 Glycine max
Glyma.20G052500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 11864898-11866897 Glycine max
Glyma.20G052500 2.0kb downstream 2.0kb downstream 10791 true Chr20: 11866898-11877688 Glycine max
Glyma.20G052500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 11875689-11877688 Glycine max
Glyma.20G052500 5.0kb upstream 5.0kb upstream 13791 true Chr20: 11861898-11875688 Glycine max
Glyma.20G052500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 11861898-11866897 Glycine max
Glyma.20G052500 5.0kb downstream 5.0kb downstream 13791 true Chr20: 11866898-11880688 Glycine max
Glyma.20G052500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 11875689-11880688 Glycine max
Glyma.20G052500 10.0kb upstream 10.0kb upstream 18791 true Chr20: 11856898-11875688 Glycine max
Glyma.20G052500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 11856898-11866897 Glycine max
Glyma.20G052500 10.0kb downstream 10.0kb downstream 18791 true Chr20: 11866898-11885688 Glycine max
Glyma.20G052500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 11875689-11885688 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309915 5265 Fabidae View MSA
124060995 5270 Rosid View MSA
123750944 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.527 0.0 83.4008    
cufflinks 47.8415 0.0 224.321 High  
cufflinks 25.315 0.0 84.6486 High  
cufflinks 34.946 0.0 147.505 High  
cufflinks 28.512 0.0 125.442 High  
cufflinks 15.6539 0.0 55.053   Low
cufflinks 87.4942 0.0 546.015 High High
cufflinks 24.212 0.0 92.2419 High  
cufflinks 30.1458 0.0 104.528 High  
cufflinks 3.556        
cufflinks 1.233       Low
cufflinks 5.233        
cufflinks 4.217        
cufflinks 4.371        
cufflinks 2.057       Low
cufflinks 5.617        
cufflinks 3.679        
cufflinks 5.268        
cufflinks 9.972     High High
cufflinks 5.806        
cufflinks 1.727       Low
cufflinks 5.589        
cufflinks 6.566        
cufflinks 1.223       Low
cufflinks 5.386        
cufflinks 3.362        

0 Strain