Gene : Glyma.20G040400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19241:SF158 - ABC TRANSPORTER G FAMILY MEMBER 23 Genomic Order:  404
Name:  ? Glyma.20G040400 Secondary Identifier:  ? PAC:30521907
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G040400 0.5kb upstream 0.5kb upstream 2669 true Chr20: 7143805-7146473 Glycine max
Glyma.20G040400 0.5kb upstream 0.5kb upstream 500 false Chr20: 7143805-7144304 Glycine max
Glyma.20G040400 0.5kb downstream 0.5kb downstream 2669 true Chr20: 7144305-7146973 Glycine max
Glyma.20G040400 0.5kb downstream 0.5kb downstream 500 false Chr20: 7146474-7146973 Glycine max
Glyma.20G040400 1.0kb upstream 1.0kb upstream 3169 true Chr20: 7143305-7146473 Glycine max
Glyma.20G040400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 7143305-7144304 Glycine max
Glyma.20G040400 1.0kb downstream 1.0kb downstream 3169 true Chr20: 7144305-7147473 Glycine max
Glyma.20G040400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 7146474-7147473 Glycine max
Glyma.20G040400 2.0kb upstream 2.0kb upstream 4169 true Chr20: 7142305-7146473 Glycine max
Glyma.20G040400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 7142305-7144304 Glycine max
Glyma.20G040400 2.0kb downstream 2.0kb downstream 4169 true Chr20: 7144305-7148473 Glycine max
Glyma.20G040400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 7146474-7148473 Glycine max
Glyma.20G040400 5.0kb upstream 5.0kb upstream 7169 true Chr20: 7139305-7146473 Glycine max
Glyma.20G040400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 7139305-7144304 Glycine max
Glyma.20G040400 5.0kb downstream 5.0kb downstream 7169 true Chr20: 7144305-7151473 Glycine max
Glyma.20G040400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 7146474-7151473 Glycine max
Glyma.20G040400 10.0kb upstream 10.0kb upstream 12169 true Chr20: 7134305-7146473 Glycine max
Glyma.20G040400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 7134305-7144304 Glycine max
Glyma.20G040400 10.0kb downstream 10.0kb downstream 12169 true Chr20: 7144305-7156473 Glycine max
Glyma.20G040400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 7146474-7156473 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309329 5265 Fabidae View MSA
124066489 5270 Rosid View MSA
123753751 5271 Pentapetalae View MSA
122795312 5272 Eudicot View MSA
122051259 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0298023 0.0 0.123356 Low Low
cufflinks 0.0560951 0.0 0.224821 Low Low
cufflinks 0.522302 0.0 1.89616    
cufflinks 0.120913 0.0 0.471192 Low  
cufflinks 0.950245 0.0 3.32054    
cufflinks 1.00929 0.0 3.50078    
cufflinks 0.05266 0.0 0.211929 Low Low
cufflinks 1.55148 0.0 5.10196   High
cufflinks 0.962062 0.0 3.34751    
cufflinks 0.164        
cufflinks 0.079        
cufflinks 0.154        
cufflinks 0.127        
cufflinks 0.023     Low  
cufflinks 0.13        
cufflinks 0.016     Low Low
cufflinks 0.559       High
cufflinks 0.038     Low  
cufflinks 0.052     Low  
cufflinks 0.032     Low  
cufflinks 0.3        
cufflinks 0.016     Low Low
cufflinks 0.026     Low  
cufflinks 1.159       High
cufflinks 0.009     Low Low
cufflinks 0.555       High

0 Strain