Gene : Glyma.20G041100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33977:SF1 - ZINC ION BINDING PROTEIN Genomic Order:  411
Name:  ? Glyma.20G041100 Secondary Identifier:  ? PAC:30522471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G041100 0.5kb upstream 0.5kb upstream 5944 true Chr20: 7220863-7226806 Glycine max
Glyma.20G041100 0.5kb upstream 0.5kb upstream 500 false Chr20: 7226307-7226806 Glycine max
Glyma.20G041100 0.5kb downstream 0.5kb downstream 5944 true Chr20: 7220363-7226306 Glycine max
Glyma.20G041100 0.5kb downstream 0.5kb downstream 500 false Chr20: 7220363-7220862 Glycine max
Glyma.20G041100 1.0kb upstream 1.0kb upstream 6444 true Chr20: 7220863-7227306 Glycine max
Glyma.20G041100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 7226307-7227306 Glycine max
Glyma.20G041100 1.0kb downstream 1.0kb downstream 6444 true Chr20: 7219863-7226306 Glycine max
Glyma.20G041100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 7219863-7220862 Glycine max
Glyma.20G041100 2.0kb upstream 2.0kb upstream 7444 true Chr20: 7220863-7228306 Glycine max
Glyma.20G041100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 7226307-7228306 Glycine max
Glyma.20G041100 2.0kb downstream 2.0kb downstream 7444 true Chr20: 7218863-7226306 Glycine max
Glyma.20G041100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 7218863-7220862 Glycine max
Glyma.20G041100 5.0kb upstream 5.0kb upstream 10444 true Chr20: 7220863-7231306 Glycine max
Glyma.20G041100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 7226307-7231306 Glycine max
Glyma.20G041100 5.0kb downstream 5.0kb downstream 10444 true Chr20: 7215863-7226306 Glycine max
Glyma.20G041100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 7215863-7220862 Glycine max
Glyma.20G041100 10.0kb upstream 10.0kb upstream 15444 true Chr20: 7220863-7236306 Glycine max
Glyma.20G041100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 7226307-7236306 Glycine max
Glyma.20G041100 10.0kb downstream 10.0kb downstream 15444 true Chr20: 7210863-7226306 Glycine max
Glyma.20G041100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 7210863-7220862 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305839 5265 Fabidae View MSA
124067545 5270 Rosid View MSA
123749015 5271 Pentapetalae View MSA
122795636 5272 Eudicot View MSA
122049514 5273 Angiosperm View MSA
121311449 5274 Embryophyte View MSA
123348744 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00541423 0.0 0.0256161 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00801518 0.0 0.0367112 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low High
cufflinks 0.006     Low  
cufflinks 0.002     Low Low
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  

0 Strain