Gene : Glyma.20G042000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10015//PTHR10015:SF177 - HEAT SHOCK TRANSCRIPTION FACTOR Genomic Order:  420
Name:  ? Glyma.20G042000 Secondary Identifier:  ? PAC:30522283
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G042000 0.5kb upstream 0.5kb upstream 2785 true Chr20: 7515752-7518536 Glycine max
Glyma.20G042000 0.5kb upstream 0.5kb upstream 500 false Chr20: 7515752-7516251 Glycine max
Glyma.20G042000 0.5kb downstream 0.5kb downstream 2785 true Chr20: 7516252-7519036 Glycine max
Glyma.20G042000 0.5kb downstream 0.5kb downstream 500 false Chr20: 7518537-7519036 Glycine max
Glyma.20G042000 1.0kb upstream 1.0kb upstream 3285 true Chr20: 7515252-7518536 Glycine max
Glyma.20G042000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 7515252-7516251 Glycine max
Glyma.20G042000 1.0kb downstream 1.0kb downstream 3285 true Chr20: 7516252-7519536 Glycine max
Glyma.20G042000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 7518537-7519536 Glycine max
Glyma.20G042000 2.0kb upstream 2.0kb upstream 4285 true Chr20: 7514252-7518536 Glycine max
Glyma.20G042000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 7514252-7516251 Glycine max
Glyma.20G042000 2.0kb downstream 2.0kb downstream 4285 true Chr20: 7516252-7520536 Glycine max
Glyma.20G042000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 7518537-7520536 Glycine max
Glyma.20G042000 5.0kb upstream 5.0kb upstream 7285 true Chr20: 7511252-7518536 Glycine max
Glyma.20G042000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 7511252-7516251 Glycine max
Glyma.20G042000 5.0kb downstream 5.0kb downstream 7285 true Chr20: 7516252-7523536 Glycine max
Glyma.20G042000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 7518537-7523536 Glycine max
Glyma.20G042000 10.0kb upstream 10.0kb upstream 12285 true Chr20: 7506252-7518536 Glycine max
Glyma.20G042000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 7506252-7516251 Glycine max
Glyma.20G042000 10.0kb downstream 10.0kb downstream 12285 true Chr20: 7516252-7528536 Glycine max
Glyma.20G042000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 7518537-7528536 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254177 5265 Fabidae View MSA
124070016 5270 Rosid View MSA
123749561 5271 Pentapetalae View MSA
122794562 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.31643 0.0 13.2234    
cufflinks 0.254628 0.0 0.980735   Low
cufflinks 2.32406 0.0 7.741    
cufflinks 5.05851 0.0 15.2042    
cufflinks 6.22985 0.0 18.1681   High
cufflinks 1.88612 0.0 6.46985    
cufflinks 1.59862 0.0 5.54621    
cufflinks 2.67364 0.0 8.75551    
cufflinks 0.132        
cufflinks 0.008     Low Low
cufflinks 0.384        
cufflinks 2.995       High
cufflinks 5.36       High
cufflinks 0.008     Low Low
cufflinks 0.045     Low  
cufflinks 0.066     Low  
cufflinks 0.272        
cufflinks 1.308       High
cufflinks 0.026     Low  
cufflinks 0.008     Low Low
cufflinks 0.033     Low  
cufflinks 0.036     Low  
cufflinks 0.026     Low  
cufflinks 0.022     Low  
cufflinks 0.066     Low  

0 Strain