Gene : Glyma.20G044800 G. max Wm82.a2.v1
Defline:  (1 of 105) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  448
Name:  ? Glyma.20G044800 Secondary Identifier:  ? PAC:30523159
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G044800 0.5kb upstream 0.5kb upstream 7551 true Chr20: 8268001-8275551 Glycine max
Glyma.20G044800 0.5kb upstream 0.5kb upstream 500 false Chr20: 8268001-8268500 Glycine max
Glyma.20G044800 0.5kb downstream 0.5kb downstream 7551 true Chr20: 8268501-8276051 Glycine max
Glyma.20G044800 0.5kb downstream 0.5kb downstream 500 false Chr20: 8275552-8276051 Glycine max
Glyma.20G044800 1.0kb upstream 1.0kb upstream 8051 true Chr20: 8267501-8275551 Glycine max
Glyma.20G044800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 8267501-8268500 Glycine max
Glyma.20G044800 1.0kb downstream 1.0kb downstream 8051 true Chr20: 8268501-8276551 Glycine max
Glyma.20G044800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 8275552-8276551 Glycine max
Glyma.20G044800 2.0kb upstream 2.0kb upstream 9051 true Chr20: 8266501-8275551 Glycine max
Glyma.20G044800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 8266501-8268500 Glycine max
Glyma.20G044800 2.0kb downstream 2.0kb downstream 9051 true Chr20: 8268501-8277551 Glycine max
Glyma.20G044800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 8275552-8277551 Glycine max
Glyma.20G044800 5.0kb upstream 5.0kb upstream 12051 true Chr20: 8263501-8275551 Glycine max
Glyma.20G044800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 8263501-8268500 Glycine max
Glyma.20G044800 5.0kb downstream 5.0kb downstream 12051 true Chr20: 8268501-8280551 Glycine max
Glyma.20G044800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 8275552-8280551 Glycine max
Glyma.20G044800 10.0kb upstream 10.0kb upstream 17051 true Chr20: 8258501-8275551 Glycine max
Glyma.20G044800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 8258501-8268500 Glycine max
Glyma.20G044800 10.0kb downstream 10.0kb downstream 17051 true Chr20: 8268501-8285551 Glycine max
Glyma.20G044800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 8275552-8285551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309281 5265 Fabidae View MSA
124066390 5270 Rosid View MSA
123747844 5271 Pentapetalae View MSA
122788467 5272 Eudicot View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.886 0.0 103.465 High  
cufflinks 33.0022 0.0 89.3814 High  
cufflinks 116.94 0.0 374.827 High High
cufflinks 63.0296 0.0 181.686 High  
cufflinks 24.6102 0.0 65.8037 High Low
cufflinks 49.2905 0.0 137.778 High  
cufflinks 25.893 0.0 69.3002 High  
cufflinks 94.3127 0.0 288.624 High High
cufflinks 24.8471 0.0 66.4997 High  
cufflinks 15.202     High High
cufflinks 4.15        
cufflinks 14.062     High High
cufflinks 4.161        
cufflinks 3.443        
cufflinks 1.782       Low
cufflinks 4.71        
cufflinks 7.027     High  
cufflinks 11.587     High High
cufflinks 6.957        
cufflinks 4.799        
cufflinks 4.051        
cufflinks 4.822        
cufflinks 3.973        
cufflinks 3.903        
cufflinks 5.302        
cufflinks 5.087        

0 Strain