Gene : Glyma.20G046400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23422 - DIPEPTIDYL PEPTIDASE III-RELATED Genomic Order:  464
Name:  ? Glyma.20G046400 Secondary Identifier:  ? PAC:30520338
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G046400 0.5kb upstream 0.5kb upstream 3744 true Chr20: 8611657-8615400 Glycine max
Glyma.20G046400 0.5kb upstream 0.5kb upstream 500 false Chr20: 8614901-8615400 Glycine max
Glyma.20G046400 0.5kb downstream 0.5kb downstream 3744 true Chr20: 8611157-8614900 Glycine max
Glyma.20G046400 0.5kb downstream 0.5kb downstream 500 false Chr20: 8611157-8611656 Glycine max
Glyma.20G046400 1.0kb upstream 1.0kb upstream 4244 true Chr20: 8611657-8615900 Glycine max
Glyma.20G046400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 8614901-8615900 Glycine max
Glyma.20G046400 1.0kb downstream 1.0kb downstream 4244 true Chr20: 8610657-8614900 Glycine max
Glyma.20G046400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 8610657-8611656 Glycine max
Glyma.20G046400 2.0kb upstream 2.0kb upstream 5244 true Chr20: 8611657-8616900 Glycine max
Glyma.20G046400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 8614901-8616900 Glycine max
Glyma.20G046400 2.0kb downstream 2.0kb downstream 5244 true Chr20: 8609657-8614900 Glycine max
Glyma.20G046400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 8609657-8611656 Glycine max
Glyma.20G046400 5.0kb upstream 5.0kb upstream 8244 true Chr20: 8611657-8619900 Glycine max
Glyma.20G046400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 8614901-8619900 Glycine max
Glyma.20G046400 5.0kb downstream 5.0kb downstream 8244 true Chr20: 8606657-8614900 Glycine max
Glyma.20G046400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 8606657-8611656 Glycine max
Glyma.20G046400 10.0kb upstream 10.0kb upstream 13244 true Chr20: 8611657-8624900 Glycine max
Glyma.20G046400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 8614901-8624900 Glycine max
Glyma.20G046400 10.0kb downstream 10.0kb downstream 13244 true Chr20: 8601657-8614900 Glycine max
Glyma.20G046400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 8601657-8611656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121607092 5273 Angiosperm Singleton cluster - no MSA
122238275 5265 Fabidae Singleton cluster - no MSA
123983724 5270 Rosid Singleton cluster - no MSA
123559304 5271 Pentapetalae Singleton cluster - no MSA
122594110 5272 Eudicot Singleton cluster - no MSA
120879375 5274 Embryophyte Singleton cluster - no MSA
122920251 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.848149 0.0 3.94364    
cufflinks 2.05364 0.0 8.26868   High
cufflinks 1.32304 0.0 5.76504   High
cufflinks 0.387062 0.0 2.8158    
cufflinks 0.0640395 0.0 0.267238 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.18105 0.0 0.713669 Low  
cufflinks 0.184091 0.0 0.724505 Low  
cufflinks 0.260741 0.0 1.01163    
cufflinks 0.476        
cufflinks 0.236       Low
cufflinks 0.67        
cufflinks 0.745       High
cufflinks 0.664        
cufflinks 0.183       Low
cufflinks 0.501        
cufflinks 0.34        
cufflinks 0.569        
cufflinks 0.765       High
cufflinks 0.628        
cufflinks 0.276       Low
cufflinks 0.671        
cufflinks 0.506        
cufflinks 0.273       Low
cufflinks 0.526        
cufflinks 0.363        

0 Strain