Gene : Glyma.20G046700 G. max Wm82.a2.v1
Defline:  (1 of 55) PF00627 - UBA/TS-N domain Genomic Order:  467
Name:  ? Glyma.20G046700 Secondary Identifier:  ? PAC:30522348
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G046700 0.5kb upstream 0.5kb upstream 6121 true Chr20: 8654050-8660170 Glycine max
Glyma.20G046700 0.5kb upstream 0.5kb upstream 500 false Chr20: 8654050-8654549 Glycine max
Glyma.20G046700 0.5kb downstream 0.5kb downstream 6121 true Chr20: 8654550-8660670 Glycine max
Glyma.20G046700 0.5kb downstream 0.5kb downstream 500 false Chr20: 8660171-8660670 Glycine max
Glyma.20G046700 1.0kb upstream 1.0kb upstream 6621 true Chr20: 8653550-8660170 Glycine max
Glyma.20G046700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 8653550-8654549 Glycine max
Glyma.20G046700 1.0kb downstream 1.0kb downstream 6621 true Chr20: 8654550-8661170 Glycine max
Glyma.20G046700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 8660171-8661170 Glycine max
Glyma.20G046700 2.0kb upstream 2.0kb upstream 7621 true Chr20: 8652550-8660170 Glycine max
Glyma.20G046700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 8652550-8654549 Glycine max
Glyma.20G046700 2.0kb downstream 2.0kb downstream 7621 true Chr20: 8654550-8662170 Glycine max
Glyma.20G046700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 8660171-8662170 Glycine max
Glyma.20G046700 5.0kb upstream 5.0kb upstream 10621 true Chr20: 8649550-8660170 Glycine max
Glyma.20G046700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 8649550-8654549 Glycine max
Glyma.20G046700 5.0kb downstream 5.0kb downstream 10621 true Chr20: 8654550-8665170 Glycine max
Glyma.20G046700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 8660171-8665170 Glycine max
Glyma.20G046700 10.0kb upstream 10.0kb upstream 15621 true Chr20: 8644550-8660170 Glycine max
Glyma.20G046700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 8644550-8654549 Glycine max
Glyma.20G046700 10.0kb downstream 10.0kb downstream 15621 true Chr20: 8654550-8670170 Glycine max
Glyma.20G046700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 8660171-8670170 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309331 5265 Fabidae View MSA
124063502 5270 Rosid View MSA
123746893 5271 Pentapetalae View MSA
122791489 5272 Eudicot View MSA
122045996 5273 Angiosperm View MSA
121344407 5274 Embryophyte View MSA
123380038 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.53006 0.0 33.2333    
cufflinks 9.47717 0.0 32.9032    
cufflinks 12.1914 0.0 41.6364   High
cufflinks 9.35764 0.0 32.256    
cufflinks 8.31225 0.0 25.1757    
cufflinks 8.45063 0.0 29.4301    
cufflinks 14.9827 0.0 51.3772   High
cufflinks 9.06564 0.0 31.2609    
cufflinks 8.66835 0.0 30.3957    
cufflinks 1.47       Low
cufflinks 2.547       High
cufflinks 2.724       High
cufflinks 1.862        
cufflinks 2.082        
cufflinks 2.248        
cufflinks 1.698        
cufflinks 1.824        
cufflinks 2.358       High
cufflinks 2.23        
cufflinks 1.747        
cufflinks 2.125        
cufflinks 1.743        
cufflinks 1.835        
cufflinks 2.127        
cufflinks 1.594       Low
cufflinks 2.043        

0 Strain