Gene : Glyma.20G047300 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG4766 - Uncharacterized conserved protein Genomic Order:  473
Name:  ? Glyma.20G047300 Secondary Identifier:  ? PAC:30523386
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G047300 0.5kb upstream 0.5kb upstream 2046 true Chr20: 8872736-8874781 Glycine max
Glyma.20G047300 0.5kb upstream 0.5kb upstream 500 false Chr20: 8874282-8874781 Glycine max
Glyma.20G047300 0.5kb downstream 0.5kb downstream 2046 true Chr20: 8872236-8874281 Glycine max
Glyma.20G047300 0.5kb downstream 0.5kb downstream 500 false Chr20: 8872236-8872735 Glycine max
Glyma.20G047300 1.0kb upstream 1.0kb upstream 2546 true Chr20: 8872736-8875281 Glycine max
Glyma.20G047300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 8874282-8875281 Glycine max
Glyma.20G047300 1.0kb downstream 1.0kb downstream 2546 true Chr20: 8871736-8874281 Glycine max
Glyma.20G047300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 8871736-8872735 Glycine max
Glyma.20G047300 2.0kb upstream 2.0kb upstream 3546 true Chr20: 8872736-8876281 Glycine max
Glyma.20G047300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 8874282-8876281 Glycine max
Glyma.20G047300 2.0kb downstream 2.0kb downstream 3546 true Chr20: 8870736-8874281 Glycine max
Glyma.20G047300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 8870736-8872735 Glycine max
Glyma.20G047300 5.0kb upstream 5.0kb upstream 6546 true Chr20: 8872736-8879281 Glycine max
Glyma.20G047300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 8874282-8879281 Glycine max
Glyma.20G047300 5.0kb downstream 5.0kb downstream 6546 true Chr20: 8867736-8874281 Glycine max
Glyma.20G047300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 8867736-8872735 Glycine max
Glyma.20G047300 10.0kb upstream 10.0kb upstream 11546 true Chr20: 8872736-8884281 Glycine max
Glyma.20G047300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 8874282-8884281 Glycine max
Glyma.20G047300 10.0kb downstream 10.0kb downstream 11546 true Chr20: 8862736-8874281 Glycine max
Glyma.20G047300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 8862736-8872735 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309572 5265 Fabidae View MSA
124067397 5270 Rosid View MSA
123736760 5271 Pentapetalae View MSA
122795345 5272 Eudicot View MSA
122043328 5273 Angiosperm View MSA
121346242 5274 Embryophyte View MSA
123427938 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.09737 0.0 4.37712    
cufflinks 0.893123 0.0 3.58743    
cufflinks 1.06687 0.0 4.25156    
cufflinks 0.645504 0.0 2.62438   Low
cufflinks 2.22427 0.0 8.601   High
cufflinks 1.04631 0.0 4.17749    
cufflinks 2.48026 0.0 9.563   High
cufflinks 1.05303 0.0 4.19251    
cufflinks 1.74676 0.0 6.8333    
cufflinks 0.523        
cufflinks 0.907        
cufflinks 1.152        
cufflinks 0.881        
cufflinks 0.753        
cufflinks 1.535       High
cufflinks 0.531        
cufflinks 0.633        
cufflinks 1.48       High
cufflinks 0.38       Low
cufflinks 0.54        
cufflinks 1.038        
cufflinks 0.623        
cufflinks 0.489       Low
cufflinks 1.103        
cufflinks 0.674        
cufflinks 1.03        

0 Strain