Gene : Glyma.20G047600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10641:SF540 - MYB TRANSCRIPTION FACTOR Genomic Order:  476
Name:  ? Glyma.20G047600 Secondary Identifier:  ? PAC:30523334
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G047600 0.5kb upstream 0.5kb upstream 6066 true Chr20: 8977003-8983068 Glycine max
Glyma.20G047600 0.5kb upstream 0.5kb upstream 500 false Chr20: 8982569-8983068 Glycine max
Glyma.20G047600 0.5kb downstream 0.5kb downstream 6066 true Chr20: 8976503-8982568 Glycine max
Glyma.20G047600 0.5kb downstream 0.5kb downstream 500 false Chr20: 8976503-8977002 Glycine max
Glyma.20G047600 1.0kb upstream 1.0kb upstream 6566 true Chr20: 8977003-8983568 Glycine max
Glyma.20G047600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 8982569-8983568 Glycine max
Glyma.20G047600 1.0kb downstream 1.0kb downstream 6566 true Chr20: 8976003-8982568 Glycine max
Glyma.20G047600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 8976003-8977002 Glycine max
Glyma.20G047600 2.0kb upstream 2.0kb upstream 7566 true Chr20: 8977003-8984568 Glycine max
Glyma.20G047600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 8982569-8984568 Glycine max
Glyma.20G047600 2.0kb downstream 2.0kb downstream 7566 true Chr20: 8975003-8982568 Glycine max
Glyma.20G047600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 8975003-8977002 Glycine max
Glyma.20G047600 5.0kb upstream 5.0kb upstream 10566 true Chr20: 8977003-8987568 Glycine max
Glyma.20G047600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 8982569-8987568 Glycine max
Glyma.20G047600 5.0kb downstream 5.0kb downstream 10566 true Chr20: 8972003-8982568 Glycine max
Glyma.20G047600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 8972003-8977002 Glycine max
Glyma.20G047600 10.0kb upstream 10.0kb upstream 15566 true Chr20: 8977003-8992568 Glycine max
Glyma.20G047600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 8982569-8992568 Glycine max
Glyma.20G047600 10.0kb downstream 10.0kb downstream 15566 true Chr20: 8967003-8982568 Glycine max
Glyma.20G047600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 8967003-8977002 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254785 5265 Fabidae View MSA
124070985 5270 Rosid View MSA
123747278 5271 Pentapetalae View MSA
122786891 5272 Eudicot View MSA
122046839 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.958517 0.0 8.09613    
cufflinks 1.46083 0.0 9.98936    
cufflinks 0.725789 0.0 5.98606    
cufflinks 0.983511 0.0 7.19822    
cufflinks 1.8463 0.0 11.4766   High
cufflinks 1.38174 0.0 6.23153    
cufflinks 1.44813 0.0 10.539    
cufflinks 0.845666 0.0 6.66442    
cufflinks 0.481493 0.0 2.904   Low
cufflinks 0.204        
cufflinks 0.056       Low
cufflinks 0.284        
cufflinks 0.331        
cufflinks 0.443        
cufflinks 0.046     Low Low
cufflinks 0.328        
cufflinks 0.028     Low Low
cufflinks 0.545       High
cufflinks 0.387        
cufflinks 0.378        
cufflinks 0.049     Low Low
cufflinks 0.386        
cufflinks 0.319        
cufflinks 0.082        
cufflinks 0.286        
cufflinks 0.046     Low Low

0 Strain