Gene : Glyma.20G033900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31867:SF11 - EXPANSIN-A14 Genomic Order:  339
Name:  ? Glyma.20G033900 Secondary Identifier:  ? PAC:30523026
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G033900 0.5kb upstream 0.5kb upstream 2786 true Chr20: 4644906-4647691 Glycine max
Glyma.20G033900 0.5kb upstream 0.5kb upstream 500 false Chr20: 4644906-4645405 Glycine max
Glyma.20G033900 0.5kb downstream 0.5kb downstream 2786 true Chr20: 4645406-4648191 Glycine max
Glyma.20G033900 0.5kb downstream 0.5kb downstream 500 false Chr20: 4647692-4648191 Glycine max
Glyma.20G033900 1.0kb upstream 1.0kb upstream 3286 true Chr20: 4644406-4647691 Glycine max
Glyma.20G033900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 4644406-4645405 Glycine max
Glyma.20G033900 1.0kb downstream 1.0kb downstream 3286 true Chr20: 4645406-4648691 Glycine max
Glyma.20G033900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 4647692-4648691 Glycine max
Glyma.20G033900 2.0kb upstream 2.0kb upstream 4286 true Chr20: 4643406-4647691 Glycine max
Glyma.20G033900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 4643406-4645405 Glycine max
Glyma.20G033900 2.0kb downstream 2.0kb downstream 4286 true Chr20: 4645406-4649691 Glycine max
Glyma.20G033900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 4647692-4649691 Glycine max
Glyma.20G033900 5.0kb upstream 5.0kb upstream 7286 true Chr20: 4640406-4647691 Glycine max
Glyma.20G033900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 4640406-4645405 Glycine max
Glyma.20G033900 5.0kb downstream 5.0kb downstream 7286 true Chr20: 4645406-4652691 Glycine max
Glyma.20G033900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 4647692-4652691 Glycine max
Glyma.20G033900 10.0kb upstream 10.0kb upstream 12286 true Chr20: 4635406-4647691 Glycine max
Glyma.20G033900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 4635406-4645405 Glycine max
Glyma.20G033900 10.0kb downstream 10.0kb downstream 12286 true Chr20: 4645406-4657691 Glycine max
Glyma.20G033900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 4647692-4657691 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313944 5265 Fabidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.67143 0.0 20.7342   Low
cufflinks 43.3452 0.0 158.055 High  
cufflinks 33.495 0.0 119.228 High  
cufflinks 99.439 0.0 390.843 High High
cufflinks 60.2894 0.0 233.699 High  
cufflinks 60.7038 0.0 236.202 High  
cufflinks 17.1813 0.0 60.4109    
cufflinks 42.6344 0.0 156.053 High  
cufflinks 28.1974 0.0 98.912 High  
cufflinks 12.97     High  
cufflinks 3.384       Low
cufflinks 12.102     High  
cufflinks 39.676     High High
cufflinks 34.751     High  
cufflinks 3.71       Low
cufflinks 27.632     High  
cufflinks 2.021       Low
cufflinks 25.532     High  
cufflinks 32.581     High  
cufflinks 13.144     High  
cufflinks 10.884     High  
cufflinks 22.542     High  
cufflinks 37.782     High High
cufflinks 11.401     High  
cufflinks 23.275     High  
cufflinks 11.382     High  

0 Strain