Gene : Glyma.20G027200 G. max Wm82.a2.v1
Genomic Order:  272 Name:  ? Glyma.20G027200
Secondary Identifier:  ? PAC:30520127
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G027200 0.5kb upstream 0.5kb upstream 1293 true Chr20: 3008082-3009374 Glycine max
Glyma.20G027200 0.5kb upstream 0.5kb upstream 500 false Chr20: 3008875-3009374 Glycine max
Glyma.20G027200 0.5kb downstream 0.5kb downstream 1293 true Chr20: 3007582-3008874 Glycine max
Glyma.20G027200 0.5kb downstream 0.5kb downstream 500 false Chr20: 3007582-3008081 Glycine max
Glyma.20G027200 1.0kb upstream 1.0kb upstream 1793 true Chr20: 3008082-3009874 Glycine max
Glyma.20G027200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 3008875-3009874 Glycine max
Glyma.20G027200 1.0kb downstream 1.0kb downstream 1793 true Chr20: 3007082-3008874 Glycine max
Glyma.20G027200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 3007082-3008081 Glycine max
Glyma.20G027200 2.0kb upstream 2.0kb upstream 2793 true Chr20: 3008082-3010874 Glycine max
Glyma.20G027200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 3008875-3010874 Glycine max
Glyma.20G027200 2.0kb downstream 2.0kb downstream 2793 true Chr20: 3006082-3008874 Glycine max
Glyma.20G027200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 3006082-3008081 Glycine max
Glyma.20G027200 5.0kb upstream 5.0kb upstream 5793 true Chr20: 3008082-3013874 Glycine max
Glyma.20G027200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 3008875-3013874 Glycine max
Glyma.20G027200 5.0kb downstream 5.0kb downstream 5793 true Chr20: 3003082-3008874 Glycine max
Glyma.20G027200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 3003082-3008081 Glycine max
Glyma.20G027200 10.0kb upstream 10.0kb upstream 10793 true Chr20: 3008082-3018874 Glycine max
Glyma.20G027200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 3008875-3018874 Glycine max
Glyma.20G027200 10.0kb downstream 10.0kb downstream 10793 true Chr20: 2998082-3008874 Glycine max
Glyma.20G027200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2998082-3008081 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313468 5265 Fabidae View MSA
124062526 5270 Rosid View MSA
123752434 5271 Pentapetalae View MSA
122774556 5272 Eudicot View MSA
122048059 5273 Angiosperm View MSA
121351228 5274 Embryophyte View MSA
123382065 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 272.599 0.0 859.816 High High
cufflinks 117.555 0.0 327.507 High  
cufflinks 165.564 0.0 480.199 High High
cufflinks 23.6616 0.0 64.6164 High  
cufflinks 10.4677 0.0 31.0461    
cufflinks 7.13305 0.0 22.4401   Low
cufflinks 11.2137 0.0 33.0419    
cufflinks 111.322 0.0 308.349 High  
cufflinks 15.7601 0.0 44.6445    
cufflinks 48.856     High  
cufflinks 1.409       Low
cufflinks 71.407     High  
cufflinks 9.596     High  
cufflinks 0.787       Low
cufflinks 1.99       Low
cufflinks 269.196     High High
cufflinks 5.656        
cufflinks 110.165     High  
cufflinks 45.935     High  
cufflinks 338.889     High High
cufflinks 3.926        
cufflinks 470.298     High High
cufflinks 254.558     High High
cufflinks 1.747       Low
cufflinks 308.372     High High
cufflinks 1.196       Low

0 Strain