Gene : Glyma.20G071700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  717
Name:  ? Glyma.20G071700 Secondary Identifier:  ? PAC:30521956
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G071700 0.5kb upstream 0.5kb upstream 1843 true Chr20: 25547415-25549257 Glycine max
Glyma.20G071700 0.5kb upstream 0.5kb upstream 500 false Chr20: 25548758-25549257 Glycine max
Glyma.20G071700 0.5kb downstream 0.5kb downstream 1843 true Chr20: 25546915-25548757 Glycine max
Glyma.20G071700 0.5kb downstream 0.5kb downstream 500 false Chr20: 25546915-25547414 Glycine max
Glyma.20G071700 1.0kb upstream 1.0kb upstream 2343 true Chr20: 25547415-25549757 Glycine max
Glyma.20G071700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 25548758-25549757 Glycine max
Glyma.20G071700 1.0kb downstream 1.0kb downstream 2343 true Chr20: 25546415-25548757 Glycine max
Glyma.20G071700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 25546415-25547414 Glycine max
Glyma.20G071700 2.0kb upstream 2.0kb upstream 3343 true Chr20: 25547415-25550757 Glycine max
Glyma.20G071700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 25548758-25550757 Glycine max
Glyma.20G071700 2.0kb downstream 2.0kb downstream 3343 true Chr20: 25545415-25548757 Glycine max
Glyma.20G071700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 25545415-25547414 Glycine max
Glyma.20G071700 5.0kb upstream 5.0kb upstream 6343 true Chr20: 25547415-25553757 Glycine max
Glyma.20G071700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 25548758-25553757 Glycine max
Glyma.20G071700 5.0kb downstream 5.0kb downstream 6343 true Chr20: 25542415-25548757 Glycine max
Glyma.20G071700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 25542415-25547414 Glycine max
Glyma.20G071700 10.0kb upstream 10.0kb upstream 11343 true Chr20: 25547415-25558757 Glycine max
Glyma.20G071700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 25548758-25558757 Glycine max
Glyma.20G071700 10.0kb downstream 10.0kb downstream 11343 true Chr20: 25537415-25548757 Glycine max
Glyma.20G071700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 25537415-25547414 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250243 5265 Fabidae View MSA
124039412 5270 Rosid View MSA
123611304 5271 Pentapetalae View MSA
122645875 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0207498 0.0 0.0940803 Low  
cufflinks 0.0218665 0.0 0.0986079 Low  
cufflinks 0.00592545 0.0 0.0305637 Low  
cufflinks 0.0214258 0.0 0.0966298 Low  
cufflinks 0.00322866 0.0 0.0193836 Low  
cufflinks 0.00115956 0.0 0.0107655 Low Low
cufflinks 0.00258928 0.0 0.0169871 Low Low
cufflinks 0.0137491 0.0 0.0648888 Low  
cufflinks 0.0109645 0.0 0.0530244 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low High
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.013     Low  

0 Strain