Gene : Glyma.20G072100 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  721
Name:  ? Glyma.20G072100 Secondary Identifier:  ? PAC:30521341
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G072100 0.5kb upstream 0.5kb upstream 4157 true Chr20: 25593611-25597767 Glycine max
Glyma.20G072100 0.5kb upstream 0.5kb upstream 500 false Chr20: 25597268-25597767 Glycine max
Glyma.20G072100 0.5kb downstream 0.5kb downstream 4157 true Chr20: 25593111-25597267 Glycine max
Glyma.20G072100 0.5kb downstream 0.5kb downstream 500 false Chr20: 25593111-25593610 Glycine max
Glyma.20G072100 1.0kb upstream 1.0kb upstream 4657 true Chr20: 25593611-25598267 Glycine max
Glyma.20G072100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 25597268-25598267 Glycine max
Glyma.20G072100 1.0kb downstream 1.0kb downstream 4657 true Chr20: 25592611-25597267 Glycine max
Glyma.20G072100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 25592611-25593610 Glycine max
Glyma.20G072100 2.0kb upstream 2.0kb upstream 5657 true Chr20: 25593611-25599267 Glycine max
Glyma.20G072100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 25597268-25599267 Glycine max
Glyma.20G072100 2.0kb downstream 2.0kb downstream 5657 true Chr20: 25591611-25597267 Glycine max
Glyma.20G072100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 25591611-25593610 Glycine max
Glyma.20G072100 5.0kb upstream 5.0kb upstream 8657 true Chr20: 25593611-25602267 Glycine max
Glyma.20G072100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 25597268-25602267 Glycine max
Glyma.20G072100 5.0kb downstream 5.0kb downstream 8657 true Chr20: 25588611-25597267 Glycine max
Glyma.20G072100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 25588611-25593610 Glycine max
Glyma.20G072100 10.0kb upstream 10.0kb upstream 13657 true Chr20: 25593611-25607267 Glycine max
Glyma.20G072100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 25597268-25607267 Glycine max
Glyma.20G072100 10.0kb downstream 10.0kb downstream 13657 true Chr20: 25583611-25597267 Glycine max
Glyma.20G072100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 25583611-25593610 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026454 5273 Angiosperm View MSA
122313072 5265 Fabidae View MSA
124067148 5270 Rosid View MSA
123737998 5271 Pentapetalae View MSA
122789015 5272 Eudicot View MSA
121296339 5274 Embryophyte View MSA
123334520 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0162494 0.0 0.0726061 Low  
cufflinks 0.0073149 0.0 0.0353432 Low  
cufflinks 0.0111193 0.0 0.0512349 Low  
cufflinks 0.00562617 0.0 0.027908 Low  
cufflinks 0.00242202 0.0 0.0137169 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0886475 0.0 0.35449 Low High
cufflinks 0.107019 0.0 0.424269 Low High
cufflinks 0.00564453 0.0 0.0280506 Low  
cufflinks 0.004     Low  
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain