Gene : Glyma.20G073000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  730
Name:  ? Glyma.20G073000 Secondary Identifier:  ? PAC:30519830
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G073000 0.5kb upstream 0.5kb upstream 3783 true Chr20: 25759159-25762941 Glycine max
Glyma.20G073000 0.5kb upstream 0.5kb upstream 500 false Chr20: 25762442-25762941 Glycine max
Glyma.20G073000 0.5kb downstream 0.5kb downstream 3783 true Chr20: 25758659-25762441 Glycine max
Glyma.20G073000 0.5kb downstream 0.5kb downstream 500 false Chr20: 25758659-25759158 Glycine max
Glyma.20G073000 1.0kb upstream 1.0kb upstream 4283 true Chr20: 25759159-25763441 Glycine max
Glyma.20G073000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 25762442-25763441 Glycine max
Glyma.20G073000 1.0kb downstream 1.0kb downstream 4283 true Chr20: 25758159-25762441 Glycine max
Glyma.20G073000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 25758159-25759158 Glycine max
Glyma.20G073000 2.0kb upstream 2.0kb upstream 5283 true Chr20: 25759159-25764441 Glycine max
Glyma.20G073000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 25762442-25764441 Glycine max
Glyma.20G073000 2.0kb downstream 2.0kb downstream 5283 true Chr20: 25757159-25762441 Glycine max
Glyma.20G073000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 25757159-25759158 Glycine max
Glyma.20G073000 5.0kb upstream 5.0kb upstream 8283 true Chr20: 25759159-25767441 Glycine max
Glyma.20G073000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 25762442-25767441 Glycine max
Glyma.20G073000 5.0kb downstream 5.0kb downstream 8283 true Chr20: 25754159-25762441 Glycine max
Glyma.20G073000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 25754159-25759158 Glycine max
Glyma.20G073000 10.0kb upstream 10.0kb upstream 13283 true Chr20: 25759159-25772441 Glycine max
Glyma.20G073000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 25762442-25772441 Glycine max
Glyma.20G073000 10.0kb downstream 10.0kb downstream 13283 true Chr20: 25749159-25762441 Glycine max
Glyma.20G073000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 25749159-25759158 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309511 5265 Fabidae View MSA
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131193 0.0 0.502133 Low Low
cufflinks 0.952317 0.0 3.19045   High
cufflinks 0.178195 0.0 0.671329 Low  
cufflinks 0.269063 0.0 0.99489    
cufflinks 0.633453 0.0 2.22042    
cufflinks 0.165585 0.0 0.627095 Low Low
cufflinks 0.418644 0.0 1.51217    
cufflinks 0.794287 0.0 2.7137   High
cufflinks 0.562634 0.0 1.98672    
cufflinks 0.703        
cufflinks 0.361        
cufflinks 0.507        
cufflinks 1.424        
cufflinks 1.075        
cufflinks 0.028     Low Low
cufflinks 1.515        
cufflinks 0.144       Low
cufflinks 1.271        
cufflinks 0.791        
cufflinks 1.594        
cufflinks 0.356        
cufflinks 1.638        
cufflinks 1.609        
cufflinks 0.282        
cufflinks 1.362        
cufflinks 0.512        

0 Strain