Gene : Glyma.20G070000 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  700
Name:  ? Glyma.20G070000 Secondary Identifier:  ? PAC:30522927
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G070000 0.5kb upstream 0.5kb upstream 2354 true Chr20: 24880605-24882958 Glycine max
Glyma.20G070000 0.5kb upstream 0.5kb upstream 500 false Chr20: 24880605-24881104 Glycine max
Glyma.20G070000 0.5kb downstream 0.5kb downstream 2354 true Chr20: 24881105-24883458 Glycine max
Glyma.20G070000 0.5kb downstream 0.5kb downstream 500 false Chr20: 24882959-24883458 Glycine max
Glyma.20G070000 1.0kb upstream 1.0kb upstream 2854 true Chr20: 24880105-24882958 Glycine max
Glyma.20G070000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 24880105-24881104 Glycine max
Glyma.20G070000 1.0kb downstream 1.0kb downstream 2854 true Chr20: 24881105-24883958 Glycine max
Glyma.20G070000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 24882959-24883958 Glycine max
Glyma.20G070000 2.0kb upstream 2.0kb upstream 3854 true Chr20: 24879105-24882958 Glycine max
Glyma.20G070000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 24879105-24881104 Glycine max
Glyma.20G070000 2.0kb downstream 2.0kb downstream 3854 true Chr20: 24881105-24884958 Glycine max
Glyma.20G070000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 24882959-24884958 Glycine max
Glyma.20G070000 5.0kb upstream 5.0kb upstream 6854 true Chr20: 24876105-24882958 Glycine max
Glyma.20G070000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 24876105-24881104 Glycine max
Glyma.20G070000 5.0kb downstream 5.0kb downstream 6854 true Chr20: 24881105-24887958 Glycine max
Glyma.20G070000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 24882959-24887958 Glycine max
Glyma.20G070000 10.0kb upstream 10.0kb upstream 11854 true Chr20: 24871105-24882958 Glycine max
Glyma.20G070000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 24871105-24881104 Glycine max
Glyma.20G070000 10.0kb downstream 10.0kb downstream 11854 true Chr20: 24881105-24892958 Glycine max
Glyma.20G070000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 24882959-24892958 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314182 5265 Fabidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 122.842 0.0 398.688 High High
cufflinks 10.9535 0.0 29.5514    
cufflinks 76.9022 0.0 231.732 High High
cufflinks 6.28201 0.0 17.653   Low
cufflinks 16.5056 0.0 44.0601    
cufflinks 57.5082 0.0 164.953 High  
cufflinks 3.26059 0.0 10.0138   Low
cufflinks 18.8928 0.0 50.4286    
cufflinks 32.4711 0.0 88.3309 High  
cufflinks 30.185     High  
cufflinks 124.927     High High
cufflinks 86.111     High  
cufflinks 15.035     High Low
cufflinks 7.678     High Low
cufflinks 111.544     High High
cufflinks 68.536     High  
cufflinks 20.898     High  
cufflinks 33.759     High  
cufflinks 20.416     High  
cufflinks 57.517     High  
cufflinks 134.217     High High
cufflinks 46.794     High  
cufflinks 22.116     High  
cufflinks 112.241     High High
cufflinks 37.639     High  
cufflinks 117.799     High High

0 Strain