Gene : Glyma.20G059100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Genomic Order:  591
Name:  ? Glyma.20G059100 Secondary Identifier:  ? PAC:30521070
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G059100 0.5kb upstream 0.5kb upstream 3914 true Chr20: 17888922-17892835 Glycine max
Glyma.20G059100 0.5kb upstream 0.5kb upstream 500 false Chr20: 17892336-17892835 Glycine max
Glyma.20G059100 0.5kb downstream 0.5kb downstream 3914 true Chr20: 17888422-17892335 Glycine max
Glyma.20G059100 0.5kb downstream 0.5kb downstream 500 false Chr20: 17888422-17888921 Glycine max
Glyma.20G059100 1.0kb upstream 1.0kb upstream 4414 true Chr20: 17888922-17893335 Glycine max
Glyma.20G059100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 17892336-17893335 Glycine max
Glyma.20G059100 1.0kb downstream 1.0kb downstream 4414 true Chr20: 17887922-17892335 Glycine max
Glyma.20G059100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 17887922-17888921 Glycine max
Glyma.20G059100 2.0kb upstream 2.0kb upstream 5414 true Chr20: 17888922-17894335 Glycine max
Glyma.20G059100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 17892336-17894335 Glycine max
Glyma.20G059100 2.0kb downstream 2.0kb downstream 5414 true Chr20: 17886922-17892335 Glycine max
Glyma.20G059100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 17886922-17888921 Glycine max
Glyma.20G059100 5.0kb upstream 5.0kb upstream 8414 true Chr20: 17888922-17897335 Glycine max
Glyma.20G059100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 17892336-17897335 Glycine max
Glyma.20G059100 5.0kb downstream 5.0kb downstream 8414 true Chr20: 17883922-17892335 Glycine max
Glyma.20G059100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 17883922-17888921 Glycine max
Glyma.20G059100 10.0kb upstream 10.0kb upstream 13414 true Chr20: 17888922-17902335 Glycine max
Glyma.20G059100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 17892336-17902335 Glycine max
Glyma.20G059100 10.0kb downstream 10.0kb downstream 13414 true Chr20: 17878922-17892335 Glycine max
Glyma.20G059100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 17878922-17888921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306007 5265 Fabidae View MSA
124068106 5270 Rosid View MSA
123747254 5271 Pentapetalae View MSA
122789487 5272 Eudicot View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9865 0.0 51.643    
cufflinks 15.3955 0.0 53.3444    
cufflinks 14.2801 0.0 49.0528    
cufflinks 20.4966 0.0 72.5948 High  
cufflinks 14.2592 0.0 49.1932    
cufflinks 23.3723 0.0 83.9989 High High
cufflinks 23.83 0.0 86.1034 High High
cufflinks 13.9456 0.0 47.9175    
cufflinks 16.1557 0.0 55.9928    
cufflinks 5.385       Low
cufflinks 9.832     High High
cufflinks 6.35        
cufflinks 6.48        
cufflinks 4.982       Low
cufflinks 7.773     High  
cufflinks 7.834     High  
cufflinks 8.515     High High
cufflinks 6.046        
cufflinks 6.093        
cufflinks 7.559     High  
cufflinks 7.747     High  
cufflinks 7.435     High  
cufflinks 6.785        
cufflinks 8.577     High High
cufflinks 7.205     High  
cufflinks 8.27     High  

0 Strain