Gene : Glyma.20G062100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR35708:SF1 - GB Genomic Order:  621
Name:  ? Glyma.20G062100 Secondary Identifier:  ? PAC:30519723
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G062100 0.5kb upstream 0.5kb upstream 1949 true Chr20: 19453432-19455380 Glycine max
Glyma.20G062100 0.5kb upstream 0.5kb upstream 500 false Chr20: 19454881-19455380 Glycine max
Glyma.20G062100 0.5kb downstream 0.5kb downstream 1949 true Chr20: 19452932-19454880 Glycine max
Glyma.20G062100 0.5kb downstream 0.5kb downstream 500 false Chr20: 19452932-19453431 Glycine max
Glyma.20G062100 1.0kb upstream 1.0kb upstream 2449 true Chr20: 19453432-19455880 Glycine max
Glyma.20G062100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 19454881-19455880 Glycine max
Glyma.20G062100 1.0kb downstream 1.0kb downstream 2449 true Chr20: 19452432-19454880 Glycine max
Glyma.20G062100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 19452432-19453431 Glycine max
Glyma.20G062100 2.0kb upstream 2.0kb upstream 3449 true Chr20: 19453432-19456880 Glycine max
Glyma.20G062100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 19454881-19456880 Glycine max
Glyma.20G062100 2.0kb downstream 2.0kb downstream 3449 true Chr20: 19451432-19454880 Glycine max
Glyma.20G062100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 19451432-19453431 Glycine max
Glyma.20G062100 5.0kb upstream 5.0kb upstream 6449 true Chr20: 19453432-19459880 Glycine max
Glyma.20G062100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 19454881-19459880 Glycine max
Glyma.20G062100 5.0kb downstream 5.0kb downstream 6449 true Chr20: 19448432-19454880 Glycine max
Glyma.20G062100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 19448432-19453431 Glycine max
Glyma.20G062100 10.0kb upstream 10.0kb upstream 11449 true Chr20: 19453432-19464880 Glycine max
Glyma.20G062100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 19454881-19464880 Glycine max
Glyma.20G062100 10.0kb downstream 10.0kb downstream 11449 true Chr20: 19443432-19454880 Glycine max
Glyma.20G062100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 19443432-19453431 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302802 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0575907 0.0 0.238376 Low Low
cufflinks 0.595388 0.0 2.2264    
cufflinks 0.135889 0.0 0.539294 Low Low
cufflinks 0.250335 0.0 0.972266    
cufflinks 2.52482 0.0 8.54482    
cufflinks 2.37244 0.0 8.06312    
cufflinks 0.338529 0.0 1.30037    
cufflinks 3.03958 0.0 9.9673   High
cufflinks 3.01639 0.0 9.93828   High
cufflinks 0.595        
cufflinks 0.214        
cufflinks 0.173        
cufflinks 3.042       High
cufflinks 1.904       High
cufflinks 0.104       Low
cufflinks 0.577        
cufflinks 0.299        
cufflinks 0.212        
cufflinks 0.251        
cufflinks 0.399        
cufflinks 0.283        
cufflinks 0.509        
cufflinks 0.409        
cufflinks 0.337        
cufflinks 0.617        
cufflinks 0.132       Low

0 Strain