Gene : Glyma.20G062700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31731:SF16 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN Genomic Order:  627
Name:  ? Glyma.20G062700 Secondary Identifier:  ? PAC:30519592
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G062700 0.5kb upstream 0.5kb upstream 2665 true Chr20: 20115073-20117737 Glycine max
Glyma.20G062700 0.5kb upstream 0.5kb upstream 500 false Chr20: 20117238-20117737 Glycine max
Glyma.20G062700 0.5kb downstream 0.5kb downstream 2665 true Chr20: 20114573-20117237 Glycine max
Glyma.20G062700 0.5kb downstream 0.5kb downstream 500 false Chr20: 20114573-20115072 Glycine max
Glyma.20G062700 1.0kb upstream 1.0kb upstream 3165 true Chr20: 20115073-20118237 Glycine max
Glyma.20G062700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 20117238-20118237 Glycine max
Glyma.20G062700 1.0kb downstream 1.0kb downstream 3165 true Chr20: 20114073-20117237 Glycine max
Glyma.20G062700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 20114073-20115072 Glycine max
Glyma.20G062700 2.0kb upstream 2.0kb upstream 4165 true Chr20: 20115073-20119237 Glycine max
Glyma.20G062700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 20117238-20119237 Glycine max
Glyma.20G062700 2.0kb downstream 2.0kb downstream 4165 true Chr20: 20113073-20117237 Glycine max
Glyma.20G062700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 20113073-20115072 Glycine max
Glyma.20G062700 5.0kb upstream 5.0kb upstream 7165 true Chr20: 20115073-20122237 Glycine max
Glyma.20G062700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 20117238-20122237 Glycine max
Glyma.20G062700 5.0kb downstream 5.0kb downstream 7165 true Chr20: 20110073-20117237 Glycine max
Glyma.20G062700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 20110073-20115072 Glycine max
Glyma.20G062700 10.0kb upstream 10.0kb upstream 12165 true Chr20: 20115073-20127237 Glycine max
Glyma.20G062700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 20117238-20127237 Glycine max
Glyma.20G062700 10.0kb downstream 10.0kb downstream 12165 true Chr20: 20105073-20117237 Glycine max
Glyma.20G062700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 20105073-20115072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314397 5265 Fabidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 364.81 0.0 1386.41 High High
cufflinks 73.3746 0.0 205.525 High  
cufflinks 19.9103 0.0 53.4761   Low
cufflinks 141.074 0.0 433.008 High  
cufflinks 139.573 0.0 429.139 High  
cufflinks 12.4442 0.0 34.295   Low
cufflinks 196.203 0.0 644.792 High  
cufflinks 212.937 0.0 713.626 High  
cufflinks 269.734 0.0 954.425 High  
cufflinks 18.085     High  
cufflinks 3.622       Low
cufflinks 22.931     High  
cufflinks 20.013     High  
cufflinks 41.59     High  
cufflinks 75.225     High High
cufflinks 11.379     High  
cufflinks 29.194     High  
cufflinks 27.708     High  
cufflinks 92.621     High High
cufflinks 6.864       Low
cufflinks 38.226     High  
cufflinks 8.385     High  
cufflinks 11.935     High  
cufflinks 25.883     High  
cufflinks 5.188       Low
cufflinks 10.001     High  

0 Strain