Gene : Glyma.20G055800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10516//PTHR10516:SF292 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  558
Name:  ? Glyma.20G055800 Secondary Identifier:  ? PAC:30523069
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G055800 0.5kb upstream 0.5kb upstream 7029 true Chr20: 13236728-13243756 Glycine max
Glyma.20G055800 0.5kb upstream 0.5kb upstream 500 false Chr20: 13236728-13237227 Glycine max
Glyma.20G055800 0.5kb downstream 0.5kb downstream 7029 true Chr20: 13237228-13244256 Glycine max
Glyma.20G055800 0.5kb downstream 0.5kb downstream 500 false Chr20: 13243757-13244256 Glycine max
Glyma.20G055800 1.0kb upstream 1.0kb upstream 7529 true Chr20: 13236228-13243756 Glycine max
Glyma.20G055800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 13236228-13237227 Glycine max
Glyma.20G055800 1.0kb downstream 1.0kb downstream 7529 true Chr20: 13237228-13244756 Glycine max
Glyma.20G055800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 13243757-13244756 Glycine max
Glyma.20G055800 2.0kb upstream 2.0kb upstream 8529 true Chr20: 13235228-13243756 Glycine max
Glyma.20G055800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 13235228-13237227 Glycine max
Glyma.20G055800 2.0kb downstream 2.0kb downstream 8529 true Chr20: 13237228-13245756 Glycine max
Glyma.20G055800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 13243757-13245756 Glycine max
Glyma.20G055800 5.0kb upstream 5.0kb upstream 11529 true Chr20: 13232228-13243756 Glycine max
Glyma.20G055800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 13232228-13237227 Glycine max
Glyma.20G055800 5.0kb downstream 5.0kb downstream 11529 true Chr20: 13237228-13248756 Glycine max
Glyma.20G055800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 13243757-13248756 Glycine max
Glyma.20G055800 10.0kb upstream 10.0kb upstream 16529 true Chr20: 13227228-13243756 Glycine max
Glyma.20G055800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 13227228-13237227 Glycine max
Glyma.20G055800 10.0kb downstream 10.0kb downstream 16529 true Chr20: 13237228-13253756 Glycine max
Glyma.20G055800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 13243757-13253756 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309562 5265 Fabidae View MSA
124063880 5270 Rosid View MSA
123749293 5271 Pentapetalae View MSA
122796238 5272 Eudicot View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.04598 0.0 22.3158   High
cufflinks 4.65274 0.0 17.7249    
cufflinks 2.59244 0.0 9.90365   Low
cufflinks 3.95839 0.0 15.5624    
cufflinks 5.89652 0.0 21.67   High
cufflinks 2.64031 0.0 9.84821   Low
cufflinks 4.44294 0.0 17.3046    
cufflinks 3.88994 0.0 15.5079    
cufflinks 5.05943 0.0 18.9869    
cufflinks 0.614        
cufflinks 0.228       Low
cufflinks 1.303        
cufflinks 1.803       High
cufflinks 2.767       High
cufflinks 0.376       Low
cufflinks 0.808        
cufflinks 0.478        
cufflinks 1.102        
cufflinks 1.502       High
cufflinks 0.622        
cufflinks 0.401        
cufflinks 0.723        
cufflinks 0.85        
cufflinks 0.292       Low
cufflinks 0.864        
cufflinks 0.56        

0 Strain