Gene : Glyma.20G056900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11119:SF46 - NUCLEOBASE-ASCORBATE TRANSPORTER 1 Genomic Order:  569
Name:  ? Glyma.20G056900 Secondary Identifier:  ? PAC:30520984
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G056900 0.5kb upstream 0.5kb upstream 15444 true Chr20: 15861905-15877348 Glycine max
Glyma.20G056900 0.5kb upstream 0.5kb upstream 500 false Chr20: 15876849-15877348 Glycine max
Glyma.20G056900 0.5kb downstream 0.5kb downstream 15444 true Chr20: 15861405-15876848 Glycine max
Glyma.20G056900 0.5kb downstream 0.5kb downstream 500 false Chr20: 15861405-15861904 Glycine max
Glyma.20G056900 1.0kb upstream 1.0kb upstream 15944 true Chr20: 15861905-15877848 Glycine max
Glyma.20G056900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 15876849-15877848 Glycine max
Glyma.20G056900 1.0kb downstream 1.0kb downstream 15944 true Chr20: 15860905-15876848 Glycine max
Glyma.20G056900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 15860905-15861904 Glycine max
Glyma.20G056900 2.0kb upstream 2.0kb upstream 16944 true Chr20: 15861905-15878848 Glycine max
Glyma.20G056900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 15876849-15878848 Glycine max
Glyma.20G056900 2.0kb downstream 2.0kb downstream 16944 true Chr20: 15859905-15876848 Glycine max
Glyma.20G056900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 15859905-15861904 Glycine max
Glyma.20G056900 5.0kb upstream 5.0kb upstream 19944 true Chr20: 15861905-15881848 Glycine max
Glyma.20G056900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 15876849-15881848 Glycine max
Glyma.20G056900 5.0kb downstream 5.0kb downstream 19944 true Chr20: 15856905-15876848 Glycine max
Glyma.20G056900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 15856905-15861904 Glycine max
Glyma.20G056900 10.0kb upstream 10.0kb upstream 24944 true Chr20: 15861905-15886848 Glycine max
Glyma.20G056900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 15876849-15886848 Glycine max
Glyma.20G056900 10.0kb downstream 10.0kb downstream 24944 true Chr20: 15851905-15876848 Glycine max
Glyma.20G056900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 15851905-15861904 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303688 5265 Fabidae View MSA
124067921 5270 Rosid View MSA
123749594 5271 Pentapetalae View MSA
122792857 5272 Eudicot View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.129767 0.0 0.51051 Low Low
cufflinks 3.0945 0.0 10.025   High
cufflinks 0.444658 0.0 2.19712    
cufflinks 0.58555 0.0 2.71269    
cufflinks 1.03528 0.0 4.53765    
cufflinks 0.864756 0.0 3.83453    
cufflinks 1.92603 0.0 9.95742   High
cufflinks 0.607399 0.0 2.79045    
cufflinks 0.864668 0.0 3.80596    
cufflinks 0.102        
cufflinks 0.017     Low Low
cufflinks 0.109     Low  
cufflinks 0.142        
cufflinks 0.109        
cufflinks 0.004     Low Low
cufflinks 0.109        
cufflinks 0.045     Low  
cufflinks 0.168        
cufflinks 0.269       High
cufflinks 0.107        
cufflinks 0.019     Low Low
cufflinks 0.087     Low  
cufflinks 0.129        
cufflinks 0.021     Low Low
cufflinks 0.083     Low  
cufflinks 0.05     Low  

0 Strain