Gene : Glyma.20G057100 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0511 - Ankyrin repeat protein Genomic Order:  571
Name:  ? Glyma.20G057100 Secondary Identifier:  ? PAC:30520560
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G057100 0.5kb upstream 0.5kb upstream 5518 true Chr20: 16067511-16073028 Glycine max
Glyma.20G057100 0.5kb upstream 0.5kb upstream 500 false Chr20: 16072529-16073028 Glycine max
Glyma.20G057100 0.5kb downstream 0.5kb downstream 5518 true Chr20: 16067011-16072528 Glycine max
Glyma.20G057100 0.5kb downstream 0.5kb downstream 500 false Chr20: 16067011-16067510 Glycine max
Glyma.20G057100 1.0kb upstream 1.0kb upstream 6018 true Chr20: 16067511-16073528 Glycine max
Glyma.20G057100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 16072529-16073528 Glycine max
Glyma.20G057100 1.0kb downstream 1.0kb downstream 6018 true Chr20: 16066511-16072528 Glycine max
Glyma.20G057100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 16066511-16067510 Glycine max
Glyma.20G057100 2.0kb upstream 2.0kb upstream 7018 true Chr20: 16067511-16074528 Glycine max
Glyma.20G057100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 16072529-16074528 Glycine max
Glyma.20G057100 2.0kb downstream 2.0kb downstream 7018 true Chr20: 16065511-16072528 Glycine max
Glyma.20G057100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 16065511-16067510 Glycine max
Glyma.20G057100 5.0kb upstream 5.0kb upstream 10018 true Chr20: 16067511-16077528 Glycine max
Glyma.20G057100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 16072529-16077528 Glycine max
Glyma.20G057100 5.0kb downstream 5.0kb downstream 10018 true Chr20: 16062511-16072528 Glycine max
Glyma.20G057100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 16062511-16067510 Glycine max
Glyma.20G057100 10.0kb upstream 10.0kb upstream 15018 true Chr20: 16067511-16082528 Glycine max
Glyma.20G057100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 16072529-16082528 Glycine max
Glyma.20G057100 10.0kb downstream 10.0kb downstream 15018 true Chr20: 16057511-16072528 Glycine max
Glyma.20G057100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 16057511-16067510 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309382 5265 Fabidae View MSA
124064930 5270 Rosid View MSA
123737070 5271 Pentapetalae View MSA
122793616 5272 Eudicot View MSA
122051228 5273 Angiosperm View MSA
123429159 5275 Viridiplantae View MSA
121345806 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.10632 0.0 19.5261   High
cufflinks 4.57511 0.0 13.1294    
cufflinks 4.05366 0.0 11.8082    
cufflinks 5.11523 0.0 14.4976    
cufflinks 4.10138 0.0 11.9099    
cufflinks 2.51094 0.0 7.80906   Low
cufflinks 4.91532 0.0 14.0055    
cufflinks 4.69943 0.0 13.4349    
cufflinks 4.50602 0.0 12.929    
cufflinks 1.178       Low
cufflinks 1.302       Low
cufflinks 1.582        
cufflinks 1.312       Low
cufflinks 1.241       Low
cufflinks 1.703        
cufflinks 1.976       High
cufflinks 1.373        
cufflinks 1.628        
cufflinks 1.954       High
cufflinks 1.685        
cufflinks 1.572        
cufflinks 1.916       High
cufflinks 1.817        
cufflinks 1.769        
cufflinks 1.482        
cufflinks 1.841        

0 Strain