Gene : Glyma.20G097500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  975
Name:  ? Glyma.20G097500 Secondary Identifier:  ? PAC:30520905
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G097500 0.5kb upstream 0.5kb upstream 6115 true Chr20: 34046882-34052996 Glycine max
Glyma.20G097500 0.5kb upstream 0.5kb upstream 500 false Chr20: 34046882-34047381 Glycine max
Glyma.20G097500 0.5kb downstream 0.5kb downstream 6115 true Chr20: 34047382-34053496 Glycine max
Glyma.20G097500 0.5kb downstream 0.5kb downstream 500 false Chr20: 34052997-34053496 Glycine max
Glyma.20G097500 1.0kb upstream 1.0kb upstream 6615 true Chr20: 34046382-34052996 Glycine max
Glyma.20G097500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34046382-34047381 Glycine max
Glyma.20G097500 1.0kb downstream 1.0kb downstream 6615 true Chr20: 34047382-34053996 Glycine max
Glyma.20G097500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34052997-34053996 Glycine max
Glyma.20G097500 2.0kb upstream 2.0kb upstream 7615 true Chr20: 34045382-34052996 Glycine max
Glyma.20G097500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34045382-34047381 Glycine max
Glyma.20G097500 2.0kb downstream 2.0kb downstream 7615 true Chr20: 34047382-34054996 Glycine max
Glyma.20G097500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34052997-34054996 Glycine max
Glyma.20G097500 5.0kb upstream 5.0kb upstream 10615 true Chr20: 34042382-34052996 Glycine max
Glyma.20G097500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34042382-34047381 Glycine max
Glyma.20G097500 5.0kb downstream 5.0kb downstream 10615 true Chr20: 34047382-34057996 Glycine max
Glyma.20G097500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34052997-34057996 Glycine max
Glyma.20G097500 10.0kb upstream 10.0kb upstream 15615 true Chr20: 34037382-34052996 Glycine max
Glyma.20G097500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34037382-34047381 Glycine max
Glyma.20G097500 10.0kb downstream 10.0kb downstream 15615 true Chr20: 34047382-34062996 Glycine max
Glyma.20G097500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34052997-34062996 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302839 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0201197 0.0 0.0955958 Low Low
cufflinks 3.76222 0.0 19.9679    
cufflinks 9.16315 0.0 37.2905    
cufflinks 1.81297 0.0 12.9521    
cufflinks 1.79883 0.0 12.3242    
cufflinks 0.306332 0.0 2.05754    
cufflinks 0.0381523 0.0 0.160039 Low Low
cufflinks 29.195 0.0 109.828 High High
cufflinks 1.67184 0.0 11.3653    
cufflinks 3.336       High
cufflinks 0.004     Low  
cufflinks 0.787       High
cufflinks 0.006     Low  
cufflinks 0.003     Low Low
cufflinks 0.012     Low  
cufflinks 0.023     Low  
cufflinks 0.188        
cufflinks 0.54       High
cufflinks 0.277        
cufflinks 0.004     Low  
cufflinks 0.074        
cufflinks 0.01     Low  
cufflinks 0.004     Low  
cufflinks 0.019     Low  
cufflinks 0.013     Low  
cufflinks 0.021     Low  

0 Strain