Gene : Glyma.20G098800 G. max Wm82.a2.v1
Defline:  (1 of 5) KOG4210 - Nuclear localization sequence binding protein Genomic Order:  988
Name:  ? Glyma.20G098800 Secondary Identifier:  ? PAC:30523136
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G098800 0.5kb upstream 0.5kb upstream 2669 true Chr20: 34202380-34205048 Glycine max
Glyma.20G098800 0.5kb upstream 0.5kb upstream 500 false Chr20: 34202380-34202879 Glycine max
Glyma.20G098800 0.5kb downstream 0.5kb downstream 2669 true Chr20: 34202880-34205548 Glycine max
Glyma.20G098800 0.5kb downstream 0.5kb downstream 500 false Chr20: 34205049-34205548 Glycine max
Glyma.20G098800 1.0kb upstream 1.0kb upstream 3169 true Chr20: 34201880-34205048 Glycine max
Glyma.20G098800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34201880-34202879 Glycine max
Glyma.20G098800 1.0kb downstream 1.0kb downstream 3169 true Chr20: 34202880-34206048 Glycine max
Glyma.20G098800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34205049-34206048 Glycine max
Glyma.20G098800 2.0kb upstream 2.0kb upstream 4169 true Chr20: 34200880-34205048 Glycine max
Glyma.20G098800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34200880-34202879 Glycine max
Glyma.20G098800 2.0kb downstream 2.0kb downstream 4169 true Chr20: 34202880-34207048 Glycine max
Glyma.20G098800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34205049-34207048 Glycine max
Glyma.20G098800 5.0kb upstream 5.0kb upstream 7169 true Chr20: 34197880-34205048 Glycine max
Glyma.20G098800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34197880-34202879 Glycine max
Glyma.20G098800 5.0kb downstream 5.0kb downstream 7169 true Chr20: 34202880-34210048 Glycine max
Glyma.20G098800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34205049-34210048 Glycine max
Glyma.20G098800 10.0kb upstream 10.0kb upstream 12169 true Chr20: 34192880-34205048 Glycine max
Glyma.20G098800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34192880-34202879 Glycine max
Glyma.20G098800 10.0kb downstream 10.0kb downstream 12169 true Chr20: 34202880-34215048 Glycine max
Glyma.20G098800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34205049-34215048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311286 5265 Fabidae View MSA
124069375 5270 Rosid View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24325 0.0 17.3795    
cufflinks 6.92426 0.0 19.1112    
cufflinks 2.41766 0.0 7.57984   Low
cufflinks 5.58851 0.0 15.6966    
cufflinks 6.07834 0.0 16.9739    
cufflinks 3.15259 0.0 9.55212   Low
cufflinks 11.5752 0.0 31.0402   High
cufflinks 5.22406 0.0 14.7732    
cufflinks 5.7963 0.0 16.261    
cufflinks 2.722        
cufflinks 0.936       Low
cufflinks 4.878        
cufflinks 6.156       High
cufflinks 8.028     High High
cufflinks 1.698        
cufflinks 4.148        
cufflinks 1.908        
cufflinks 4.103        
cufflinks 5.378        
cufflinks 3.226        
cufflinks 1.367       Low
cufflinks 3.583        
cufflinks 4.667        
cufflinks 1.046       Low
cufflinks 3.859        
cufflinks 1.646        

0 Strain