Gene : Glyma.20G099200 G. max Wm82.a2.v1
Defline:  (1 of 4) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide) Genomic Order:  992
Name:  ? Glyma.20G099200 Secondary Identifier:  ? PAC:30520575
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5084 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G099200 0.5kb upstream 0.5kb upstream 6605 true Chr20: 34242852-34249456 Glycine max
Glyma.20G099200 0.5kb upstream 0.5kb upstream 500 false Chr20: 34248957-34249456 Glycine max
Glyma.20G099200 0.5kb downstream 0.5kb downstream 6605 true Chr20: 34242352-34248956 Glycine max
Glyma.20G099200 0.5kb downstream 0.5kb downstream 500 false Chr20: 34242352-34242851 Glycine max
Glyma.20G099200 1.0kb upstream 1.0kb upstream 7105 true Chr20: 34242852-34249956 Glycine max
Glyma.20G099200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34248957-34249956 Glycine max
Glyma.20G099200 1.0kb downstream 1.0kb downstream 7105 true Chr20: 34241852-34248956 Glycine max
Glyma.20G099200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34241852-34242851 Glycine max
Glyma.20G099200 2.0kb upstream 2.0kb upstream 8105 true Chr20: 34242852-34250956 Glycine max
Glyma.20G099200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34248957-34250956 Glycine max
Glyma.20G099200 2.0kb downstream 2.0kb downstream 8105 true Chr20: 34240852-34248956 Glycine max
Glyma.20G099200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34240852-34242851 Glycine max
Glyma.20G099200 5.0kb upstream 5.0kb upstream 11105 true Chr20: 34242852-34253956 Glycine max
Glyma.20G099200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34248957-34253956 Glycine max
Glyma.20G099200 5.0kb downstream 5.0kb downstream 11105 true Chr20: 34237852-34248956 Glycine max
Glyma.20G099200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34237852-34242851 Glycine max
Glyma.20G099200 10.0kb upstream 10.0kb upstream 16105 true Chr20: 34242852-34258956 Glycine max
Glyma.20G099200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34248957-34258956 Glycine max
Glyma.20G099200 10.0kb downstream 10.0kb downstream 16105 true Chr20: 34232852-34248956 Glycine max
Glyma.20G099200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34232852-34242851 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311789 5265 Fabidae View MSA
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.259285 0.0 1.60022   Low
cufflinks 2.00923 0.0 7.39232    
cufflinks 0.594103 0.0 4.10201   Low
cufflinks 5.3183 0.0 16.1155   High
cufflinks 2.82628 0.0 9.48923    
cufflinks 1.05114 0.0 3.62795    
cufflinks 4.31426 0.0 13.452    
cufflinks 3.14763 0.0 12.0228    
cufflinks 1.55909 0.0 4.7385    
cufflinks 1.288       High
cufflinks 0.258        
cufflinks 0.673        
cufflinks 0.592        
cufflinks 0.753        
cufflinks 0.083       Low
cufflinks 0.266        
cufflinks 0.178        
cufflinks 1.468       High
cufflinks 0.765        
cufflinks 0.205        
cufflinks 0.168        
cufflinks 0.299        
cufflinks 0.556        
cufflinks 0.041     Low Low
cufflinks 0.193        
cufflinks 0.266        

0 Strain