Gene : Glyma.20G100800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Genomic Order:  1008
Name:  ? Glyma.20G100800 Secondary Identifier:  ? PAC:30522371
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G100800 0.5kb upstream 0.5kb upstream 12331 true Chr20: 34407800-34420130 Glycine max
Glyma.20G100800 0.5kb upstream 0.5kb upstream 500 false Chr20: 34407800-34408299 Glycine max
Glyma.20G100800 0.5kb downstream 0.5kb downstream 12331 true Chr20: 34408300-34420630 Glycine max
Glyma.20G100800 0.5kb downstream 0.5kb downstream 500 false Chr20: 34420131-34420630 Glycine max
Glyma.20G100800 1.0kb upstream 1.0kb upstream 12831 true Chr20: 34407300-34420130 Glycine max
Glyma.20G100800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34407300-34408299 Glycine max
Glyma.20G100800 1.0kb downstream 1.0kb downstream 12831 true Chr20: 34408300-34421130 Glycine max
Glyma.20G100800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34420131-34421130 Glycine max
Glyma.20G100800 2.0kb upstream 2.0kb upstream 13831 true Chr20: 34406300-34420130 Glycine max
Glyma.20G100800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34406300-34408299 Glycine max
Glyma.20G100800 2.0kb downstream 2.0kb downstream 13831 true Chr20: 34408300-34422130 Glycine max
Glyma.20G100800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34420131-34422130 Glycine max
Glyma.20G100800 5.0kb upstream 5.0kb upstream 16831 true Chr20: 34403300-34420130 Glycine max
Glyma.20G100800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34403300-34408299 Glycine max
Glyma.20G100800 5.0kb downstream 5.0kb downstream 16831 true Chr20: 34408300-34425130 Glycine max
Glyma.20G100800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34420131-34425130 Glycine max
Glyma.20G100800 10.0kb upstream 10.0kb upstream 21831 true Chr20: 34398300-34420130 Glycine max
Glyma.20G100800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34398300-34408299 Glycine max
Glyma.20G100800 10.0kb downstream 10.0kb downstream 21831 true Chr20: 34408300-34430130 Glycine max
Glyma.20G100800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34420131-34430130 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307492 5265 Fabidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.2747 0.0 12.3931    
cufflinks 5.99495 0.0 20.5693    
cufflinks 4.24854 0.0 15.0585    
cufflinks 6.13725 0.0 21.0142    
cufflinks 3.47592 0.0 12.839    
cufflinks 2.57199 0.0 8.72629   Low
cufflinks 7.99295 0.0 27.1814   High
cufflinks 4.89114 0.0 17.0993    
cufflinks 3.72028 0.0 13.5208    
cufflinks 0.679        
cufflinks 0.192       Low
cufflinks 0.966        
cufflinks 0.774        
cufflinks 0.876        
cufflinks 0.33       Low
cufflinks 0.87        
cufflinks 0.372        
cufflinks 1.211       High
cufflinks 1.467       High
cufflinks 0.912        
cufflinks 0.352       Low
cufflinks 1.006        
cufflinks 1.093        
cufflinks 0.283       Low
cufflinks 0.877        
cufflinks 0.382        

0 Strain