Gene : Glyma.20G101400 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR31086:SF2 - ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-RELATED Genomic Order:  1014
Name:  ? Glyma.20G101400 Secondary Identifier:  ? PAC:30522373
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G101400 0.5kb upstream 0.5kb upstream 6166 true Chr20: 34449093-34455258 Glycine max
Glyma.20G101400 0.5kb upstream 0.5kb upstream 500 false Chr20: 34454759-34455258 Glycine max
Glyma.20G101400 0.5kb downstream 0.5kb downstream 6166 true Chr20: 34448593-34454758 Glycine max
Glyma.20G101400 0.5kb downstream 0.5kb downstream 500 false Chr20: 34448593-34449092 Glycine max
Glyma.20G101400 1.0kb upstream 1.0kb upstream 6666 true Chr20: 34449093-34455758 Glycine max
Glyma.20G101400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34454759-34455758 Glycine max
Glyma.20G101400 1.0kb downstream 1.0kb downstream 6666 true Chr20: 34448093-34454758 Glycine max
Glyma.20G101400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34448093-34449092 Glycine max
Glyma.20G101400 2.0kb upstream 2.0kb upstream 7666 true Chr20: 34449093-34456758 Glycine max
Glyma.20G101400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34454759-34456758 Glycine max
Glyma.20G101400 2.0kb downstream 2.0kb downstream 7666 true Chr20: 34447093-34454758 Glycine max
Glyma.20G101400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34447093-34449092 Glycine max
Glyma.20G101400 5.0kb upstream 5.0kb upstream 10666 true Chr20: 34449093-34459758 Glycine max
Glyma.20G101400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34454759-34459758 Glycine max
Glyma.20G101400 5.0kb downstream 5.0kb downstream 10666 true Chr20: 34444093-34454758 Glycine max
Glyma.20G101400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34444093-34449092 Glycine max
Glyma.20G101400 10.0kb upstream 10.0kb upstream 15666 true Chr20: 34449093-34464758 Glycine max
Glyma.20G101400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34454759-34464758 Glycine max
Glyma.20G101400 10.0kb downstream 10.0kb downstream 15666 true Chr20: 34439093-34454758 Glycine max
Glyma.20G101400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34439093-34449092 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298741 5265 Fabidae View MSA
124051841 5270 Rosid View MSA
123743685 5271 Pentapetalae View MSA
122790084 5272 Eudicot View MSA
122050967 5273 Angiosperm View MSA
121312223 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.12587 0.0 5.78513    
cufflinks 0.688291 0.0 3.90917    
cufflinks 18.1861 0.0 69.8654   High
cufflinks 1.05475 0.0 5.41226    
cufflinks 1.21499 0.0 6.04404    
cufflinks 2.64067 0.0 11.9237    
cufflinks 4.16143 0.0 13.7615    
cufflinks 1.14976 0.0 5.66685    
cufflinks 0.919845 0.0 5.02611    
cufflinks 0.213        
cufflinks 0.152        
cufflinks 1.188       High
cufflinks 0.201        
cufflinks 0.174        
cufflinks 0.035     Low Low
cufflinks 0.155        
cufflinks 0.336        
cufflinks 2.02       High
cufflinks 0.075     Low Low
cufflinks 0.12        
cufflinks 0.165        
cufflinks 0.144        
cufflinks 0.105        
cufflinks 0.216        
cufflinks 0.119        
cufflinks 0.412        

0 Strain