Gene : Glyma.20G090300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11081:SF9 - FLAP ENDONUCLEASE 1 Genomic Order:  903
Name:  ? Glyma.20G090300 Secondary Identifier:  ? PAC:30522246
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G090300 0.5kb upstream 0.5kb upstream 6210 true Chr20: 33257093-33263302 Glycine max
Glyma.20G090300 0.5kb upstream 0.5kb upstream 500 false Chr20: 33262803-33263302 Glycine max
Glyma.20G090300 0.5kb downstream 0.5kb downstream 6210 true Chr20: 33256593-33262802 Glycine max
Glyma.20G090300 0.5kb downstream 0.5kb downstream 500 false Chr20: 33256593-33257092 Glycine max
Glyma.20G090300 1.0kb upstream 1.0kb upstream 6710 true Chr20: 33257093-33263802 Glycine max
Glyma.20G090300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 33262803-33263802 Glycine max
Glyma.20G090300 1.0kb downstream 1.0kb downstream 6710 true Chr20: 33256093-33262802 Glycine max
Glyma.20G090300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 33256093-33257092 Glycine max
Glyma.20G090300 2.0kb upstream 2.0kb upstream 7710 true Chr20: 33257093-33264802 Glycine max
Glyma.20G090300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 33262803-33264802 Glycine max
Glyma.20G090300 2.0kb downstream 2.0kb downstream 7710 true Chr20: 33255093-33262802 Glycine max
Glyma.20G090300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 33255093-33257092 Glycine max
Glyma.20G090300 5.0kb upstream 5.0kb upstream 10710 true Chr20: 33257093-33267802 Glycine max
Glyma.20G090300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 33262803-33267802 Glycine max
Glyma.20G090300 5.0kb downstream 5.0kb downstream 10710 true Chr20: 33252093-33262802 Glycine max
Glyma.20G090300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 33252093-33257092 Glycine max
Glyma.20G090300 10.0kb upstream 10.0kb upstream 15710 true Chr20: 33257093-33272802 Glycine max
Glyma.20G090300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 33262803-33272802 Glycine max
Glyma.20G090300 10.0kb downstream 10.0kb downstream 15710 true Chr20: 33247093-33262802 Glycine max
Glyma.20G090300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 33247093-33257092 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300730 5265 Fabidae View MSA
124061895 5270 Rosid View MSA
123737846 5271 Pentapetalae View MSA
122788743 5272 Eudicot View MSA
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.4245 0.0 33.759   Low
cufflinks 13.8948 0.0 53.0352   High
cufflinks 6.71889 0.0 31.5793   Low
cufflinks 9.04907 0.0 36.5972    
cufflinks 10.9807 0.0 47.2776    
cufflinks 8.95221 0.0 35.2356    
cufflinks 9.55947 0.0 38.5729    
cufflinks 8.84645 0.0 38.5961    
cufflinks 10.28 0.0 39.9563    
cufflinks 0.394        
cufflinks 0.217       Low
cufflinks 0.454        
cufflinks 0.698        
cufflinks 0.923       High
cufflinks 0.295        
cufflinks 0.564        
cufflinks 0.229       Low
cufflinks 0.442        
cufflinks 0.833       High
cufflinks 0.473        
cufflinks 0.265       Low
cufflinks 0.532        
cufflinks 0.76       High
cufflinks 0.232       Low
cufflinks 0.594        
cufflinks 0.298        

0 Strain