Gene : Glyma.20G092000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES Genomic Order:  920
Name:  ? Glyma.20G092000 Secondary Identifier:  ? PAC:30521660
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G092000 0.5kb upstream 0.5kb upstream 13866 true Chr20: 33557741-33571606 Glycine max
Glyma.20G092000 0.5kb upstream 0.5kb upstream 500 false Chr20: 33571107-33571606 Glycine max
Glyma.20G092000 0.5kb downstream 0.5kb downstream 13866 true Chr20: 33557241-33571106 Glycine max
Glyma.20G092000 0.5kb downstream 0.5kb downstream 500 false Chr20: 33557241-33557740 Glycine max
Glyma.20G092000 1.0kb upstream 1.0kb upstream 14366 true Chr20: 33557741-33572106 Glycine max
Glyma.20G092000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 33571107-33572106 Glycine max
Glyma.20G092000 1.0kb downstream 1.0kb downstream 14366 true Chr20: 33556741-33571106 Glycine max
Glyma.20G092000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 33556741-33557740 Glycine max
Glyma.20G092000 2.0kb upstream 2.0kb upstream 15366 true Chr20: 33557741-33573106 Glycine max
Glyma.20G092000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 33571107-33573106 Glycine max
Glyma.20G092000 2.0kb downstream 2.0kb downstream 15366 true Chr20: 33555741-33571106 Glycine max
Glyma.20G092000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 33555741-33557740 Glycine max
Glyma.20G092000 5.0kb upstream 5.0kb upstream 18366 true Chr20: 33557741-33576106 Glycine max
Glyma.20G092000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 33571107-33576106 Glycine max
Glyma.20G092000 5.0kb downstream 5.0kb downstream 18366 true Chr20: 33552741-33571106 Glycine max
Glyma.20G092000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 33552741-33557740 Glycine max
Glyma.20G092000 10.0kb upstream 10.0kb upstream 23366 true Chr20: 33557741-33581106 Glycine max
Glyma.20G092000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 33571107-33581106 Glycine max
Glyma.20G092000 10.0kb downstream 10.0kb downstream 23366 true Chr20: 33547741-33571106 Glycine max
Glyma.20G092000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 33547741-33557740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313872 5265 Fabidae View MSA
124071127 5270 Rosid View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.0743 0.0 377.042 High  
cufflinks 81.3635 0.0 341.375 High  
cufflinks 134.505 0.0 719.027 High High
cufflinks 120.198 0.0 587.213 High High
cufflinks 69.5884 0.0 272.592 High Low
cufflinks 107.804 0.0 509.712 High  
cufflinks 91.3424 0.0 390.685 High  
cufflinks 90.1843 0.0 389.264 High  
cufflinks 65.9865 0.0 257.253 High Low
cufflinks 8.818     High  
cufflinks 2.424       Low
cufflinks 10.596     High High
cufflinks 5.938        
cufflinks 4.275        
cufflinks 2.096       Low
cufflinks 6.962        
cufflinks 5.145        
cufflinks 9.603     High High
cufflinks 9.319     High  
cufflinks 8.984     High  
cufflinks 3.788        
cufflinks 8.627     High  
cufflinks 6.27        
cufflinks 3.004       Low
cufflinks 7.659     High  
cufflinks 5.57        

0 Strain