Gene : Glyma.20G082900 G. max Wm82.a2.v1
Defline:  (1 of 20) PF04827 - Plant transposon protein (Plant_tran) Genomic Order:  829
Name:  ? Glyma.20G082900 Secondary Identifier:  ? PAC:30520292
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G082900 0.5kb upstream 0.5kb upstream 1109 true Chr20: 31278014-31279122 Glycine max
Glyma.20G082900 0.5kb upstream 0.5kb upstream 500 false Chr20: 31278623-31279122 Glycine max
Glyma.20G082900 0.5kb downstream 0.5kb downstream 1109 true Chr20: 31277514-31278622 Glycine max
Glyma.20G082900 0.5kb downstream 0.5kb downstream 500 false Chr20: 31277514-31278013 Glycine max
Glyma.20G082900 1.0kb upstream 1.0kb upstream 1609 true Chr20: 31278014-31279622 Glycine max
Glyma.20G082900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 31278623-31279622 Glycine max
Glyma.20G082900 1.0kb downstream 1.0kb downstream 1609 true Chr20: 31277014-31278622 Glycine max
Glyma.20G082900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 31277014-31278013 Glycine max
Glyma.20G082900 2.0kb upstream 2.0kb upstream 2609 true Chr20: 31278014-31280622 Glycine max
Glyma.20G082900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 31278623-31280622 Glycine max
Glyma.20G082900 2.0kb downstream 2.0kb downstream 2609 true Chr20: 31276014-31278622 Glycine max
Glyma.20G082900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 31276014-31278013 Glycine max
Glyma.20G082900 5.0kb upstream 5.0kb upstream 5609 true Chr20: 31278014-31283622 Glycine max
Glyma.20G082900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 31278623-31283622 Glycine max
Glyma.20G082900 5.0kb downstream 5.0kb downstream 5609 true Chr20: 31273014-31278622 Glycine max
Glyma.20G082900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 31273014-31278013 Glycine max
Glyma.20G082900 10.0kb upstream 10.0kb upstream 10609 true Chr20: 31278014-31288622 Glycine max
Glyma.20G082900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 31278623-31288622 Glycine max
Glyma.20G082900 10.0kb downstream 10.0kb downstream 10609 true Chr20: 31268014-31278622 Glycine max
Glyma.20G082900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 31268014-31278013 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783114 5273 Angiosperm View MSA
122250480 5265 Fabidae View MSA
123993661 5270 Rosid View MSA
123754425 5271 Pentapetalae View MSA
122775803 5272 Eudicot View MSA
121351718 5274 Embryophyte View MSA
123382288 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain