Gene : Glyma.20G085800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11960:SF12 - EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4E Genomic Order:  858
Name:  ? Glyma.20G085800 Secondary Identifier:  ? PAC:30520346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G085800 0.5kb upstream 0.5kb upstream 4281 true Chr20: 31985749-31990029 Glycine max
Glyma.20G085800 0.5kb upstream 0.5kb upstream 500 false Chr20: 31985749-31986248 Glycine max
Glyma.20G085800 0.5kb downstream 0.5kb downstream 4281 true Chr20: 31986249-31990529 Glycine max
Glyma.20G085800 0.5kb downstream 0.5kb downstream 500 false Chr20: 31990030-31990529 Glycine max
Glyma.20G085800 1.0kb upstream 1.0kb upstream 4781 true Chr20: 31985249-31990029 Glycine max
Glyma.20G085800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 31985249-31986248 Glycine max
Glyma.20G085800 1.0kb downstream 1.0kb downstream 4781 true Chr20: 31986249-31991029 Glycine max
Glyma.20G085800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 31990030-31991029 Glycine max
Glyma.20G085800 2.0kb upstream 2.0kb upstream 5781 true Chr20: 31984249-31990029 Glycine max
Glyma.20G085800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 31984249-31986248 Glycine max
Glyma.20G085800 2.0kb downstream 2.0kb downstream 5781 true Chr20: 31986249-31992029 Glycine max
Glyma.20G085800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 31990030-31992029 Glycine max
Glyma.20G085800 5.0kb upstream 5.0kb upstream 8781 true Chr20: 31981249-31990029 Glycine max
Glyma.20G085800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 31981249-31986248 Glycine max
Glyma.20G085800 5.0kb downstream 5.0kb downstream 8781 true Chr20: 31986249-31995029 Glycine max
Glyma.20G085800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 31990030-31995029 Glycine max
Glyma.20G085800 10.0kb upstream 10.0kb upstream 13781 true Chr20: 31976249-31990029 Glycine max
Glyma.20G085800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 31976249-31986248 Glycine max
Glyma.20G085800 10.0kb downstream 10.0kb downstream 13781 true Chr20: 31986249-32000029 Glycine max
Glyma.20G085800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 31990030-32000029 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301107 5265 Fabidae View MSA
124067941 5270 Rosid View MSA
123737003 5271 Pentapetalae View MSA
122788011 5272 Eudicot View MSA
122048910 5273 Angiosperm View MSA
121311166 5274 Embryophyte View MSA
123428039 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.6832 0.0 63.2648 High  
cufflinks 17.3841 0.0 46.917    
cufflinks 10.2234 0.0 28.6618   Low
cufflinks 17.0252 0.0 45.9515    
cufflinks 35.6596 0.0 95.4995 High High
cufflinks 29.2195 0.0 77.9709 High  
cufflinks 18.7633 0.0 50.4213    
cufflinks 27.7976 0.0 74.1605 High  
cufflinks 19.8168 0.0 53.1703 High  
cufflinks 7.784     High  
cufflinks 3.16        
cufflinks 4.437        
cufflinks 15.286     High High
cufflinks 21.55     High High
cufflinks 2.891        
cufflinks 3.862        
cufflinks 4.35        
cufflinks 4.818        
cufflinks 6.007        
cufflinks 3.12        
cufflinks 4.384        
cufflinks 3.341        
cufflinks 4.187        
cufflinks 3.893        
cufflinks 3.582        
cufflinks 4.325        

0 Strain