Gene : Glyma.20G086000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF30 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  860
Name:  ? Glyma.20G086000 Secondary Identifier:  ? PAC:30520473
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G086000 0.5kb upstream 0.5kb upstream 1396 true Chr20: 32010090-32011485 Glycine max
Glyma.20G086000 0.5kb upstream 0.5kb upstream 500 false Chr20: 32010090-32010589 Glycine max
Glyma.20G086000 0.5kb downstream 0.5kb downstream 1396 true Chr20: 32010590-32011985 Glycine max
Glyma.20G086000 0.5kb downstream 0.5kb downstream 500 false Chr20: 32011486-32011985 Glycine max
Glyma.20G086000 1.0kb upstream 1.0kb upstream 1896 true Chr20: 32009590-32011485 Glycine max
Glyma.20G086000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 32009590-32010589 Glycine max
Glyma.20G086000 1.0kb downstream 1.0kb downstream 1896 true Chr20: 32010590-32012485 Glycine max
Glyma.20G086000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 32011486-32012485 Glycine max
Glyma.20G086000 2.0kb upstream 2.0kb upstream 2896 true Chr20: 32008590-32011485 Glycine max
Glyma.20G086000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 32008590-32010589 Glycine max
Glyma.20G086000 2.0kb downstream 2.0kb downstream 2896 true Chr20: 32010590-32013485 Glycine max
Glyma.20G086000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 32011486-32013485 Glycine max
Glyma.20G086000 5.0kb upstream 5.0kb upstream 5896 true Chr20: 32005590-32011485 Glycine max
Glyma.20G086000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 32005590-32010589 Glycine max
Glyma.20G086000 5.0kb downstream 5.0kb downstream 5896 true Chr20: 32010590-32016485 Glycine max
Glyma.20G086000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 32011486-32016485 Glycine max
Glyma.20G086000 10.0kb upstream 10.0kb upstream 10896 true Chr20: 32000590-32011485 Glycine max
Glyma.20G086000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 32000590-32010589 Glycine max
Glyma.20G086000 10.0kb downstream 10.0kb downstream 10896 true Chr20: 32010590-32021485 Glycine max
Glyma.20G086000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 32011486-32021485 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041247 5273 Angiosperm View MSA
122306472 5265 Fabidae View MSA
124071107 5270 Rosid View MSA
123742298 5271 Pentapetalae View MSA
122794517 5272 Eudicot View MSA
121344205 5274 Embryophyte View MSA
123380001 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.71898 0.0 6.30347    
cufflinks 2.63814 0.0 9.40748    
cufflinks 0.830797 0.0 3.15083   Low
cufflinks 1.59531 0.0 5.86289    
cufflinks 1.41814 0.0 5.24644    
cufflinks 2.121 0.0 7.66774    
cufflinks 3.2942 0.0 11.5073   High
cufflinks 1.69521 0.0 6.20451    
cufflinks 0.555333 0.0 2.14183   Low
cufflinks 2.207        
cufflinks 0.715        
cufflinks 1.759        
cufflinks 2.082        
cufflinks 1.912        
cufflinks 0.423       Low
cufflinks 1.936        
cufflinks 0.492       Low
cufflinks 2.107        
cufflinks 3.994       High
cufflinks 1.789        
cufflinks 0.716        
cufflinks 2.213        
cufflinks 2.434        
cufflinks 1.007        
cufflinks 1.981        
cufflinks 0.389       Low

0 Strain