Gene : Glyma.20G089100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31867:SF34 - EXPANSIN-A17-RELATED Genomic Order:  891
Name:  ? Glyma.20G089100 Secondary Identifier:  ? PAC:30521217
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G089100 0.5kb upstream 0.5kb upstream 3196 true Chr20: 33087828-33091023 Glycine max
Glyma.20G089100 0.5kb upstream 0.5kb upstream 500 false Chr20: 33090524-33091023 Glycine max
Glyma.20G089100 0.5kb downstream 0.5kb downstream 3196 true Chr20: 33087328-33090523 Glycine max
Glyma.20G089100 0.5kb downstream 0.5kb downstream 500 false Chr20: 33087328-33087827 Glycine max
Glyma.20G089100 1.0kb upstream 1.0kb upstream 3696 true Chr20: 33087828-33091523 Glycine max
Glyma.20G089100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 33090524-33091523 Glycine max
Glyma.20G089100 1.0kb downstream 1.0kb downstream 3696 true Chr20: 33086828-33090523 Glycine max
Glyma.20G089100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 33086828-33087827 Glycine max
Glyma.20G089100 2.0kb upstream 2.0kb upstream 4696 true Chr20: 33087828-33092523 Glycine max
Glyma.20G089100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 33090524-33092523 Glycine max
Glyma.20G089100 2.0kb downstream 2.0kb downstream 4696 true Chr20: 33085828-33090523 Glycine max
Glyma.20G089100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 33085828-33087827 Glycine max
Glyma.20G089100 5.0kb upstream 5.0kb upstream 7696 true Chr20: 33087828-33095523 Glycine max
Glyma.20G089100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 33090524-33095523 Glycine max
Glyma.20G089100 5.0kb downstream 5.0kb downstream 7696 true Chr20: 33082828-33090523 Glycine max
Glyma.20G089100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 33082828-33087827 Glycine max
Glyma.20G089100 10.0kb upstream 10.0kb upstream 12696 true Chr20: 33087828-33100523 Glycine max
Glyma.20G089100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 33090524-33100523 Glycine max
Glyma.20G089100 10.0kb downstream 10.0kb downstream 12696 true Chr20: 33077828-33090523 Glycine max
Glyma.20G089100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 33077828-33087827 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026644 5273 Angiosperm View MSA
122296436 5265 Fabidae View MSA
124060706 5270 Rosid View MSA
123647556 5271 Pentapetalae View MSA
122790037 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121296447 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.034213 0.0 0.153879 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.290405 0.0 2.03762    
cufflinks 0.252412 0.0 1.75203    
cufflinks 0.861443 0.0 5.28564    
cufflinks 3.70222 0.0 15.422   High
cufflinks 2.65133 0.0 14.9136    
cufflinks 0.0804752 0.0 0.325853 Low Low
cufflinks 2.9426 0.0 15.7413    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.472        
cufflinks 0.1     Low  
cufflinks 0.955        
cufflinks 1.05        
cufflinks 0.136        
cufflinks 0.003     Low Low
cufflinks 0.117        
cufflinks 0.403        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.239        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.122        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.967        

0 Strain