Gene : Glyma.20G077400 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.6.1.19 - Nucleoside-triphosphate diphosphatase / Nucleoside-triphosphate pyrophosphatase Genomic Order:  774
Name:  ? Glyma.20G077400 Secondary Identifier:  ? PAC:30521084
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6545 Glycine max pathologic  
Gmax PWY-7184 Glycine max pathologic  
Gmax PWY-7206 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G077400 0.5kb upstream 0.5kb upstream 13804 true Chr20: 28029191-28042994 Glycine max
Glyma.20G077400 0.5kb upstream 0.5kb upstream 500 false Chr20: 28042495-28042994 Glycine max
Glyma.20G077400 0.5kb downstream 0.5kb downstream 13804 true Chr20: 28028691-28042494 Glycine max
Glyma.20G077400 0.5kb downstream 0.5kb downstream 500 false Chr20: 28028691-28029190 Glycine max
Glyma.20G077400 1.0kb upstream 1.0kb upstream 14304 true Chr20: 28029191-28043494 Glycine max
Glyma.20G077400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 28042495-28043494 Glycine max
Glyma.20G077400 1.0kb downstream 1.0kb downstream 14304 true Chr20: 28028191-28042494 Glycine max
Glyma.20G077400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 28028191-28029190 Glycine max
Glyma.20G077400 2.0kb upstream 2.0kb upstream 15304 true Chr20: 28029191-28044494 Glycine max
Glyma.20G077400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 28042495-28044494 Glycine max
Glyma.20G077400 2.0kb downstream 2.0kb downstream 15304 true Chr20: 28027191-28042494 Glycine max
Glyma.20G077400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 28027191-28029190 Glycine max
Glyma.20G077400 5.0kb upstream 5.0kb upstream 18304 true Chr20: 28029191-28047494 Glycine max
Glyma.20G077400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 28042495-28047494 Glycine max
Glyma.20G077400 5.0kb downstream 5.0kb downstream 18304 true Chr20: 28024191-28042494 Glycine max
Glyma.20G077400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 28024191-28029190 Glycine max
Glyma.20G077400 10.0kb upstream 10.0kb upstream 23304 true Chr20: 28029191-28052494 Glycine max
Glyma.20G077400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 28042495-28052494 Glycine max
Glyma.20G077400 10.0kb downstream 10.0kb downstream 23304 true Chr20: 28019191-28042494 Glycine max
Glyma.20G077400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 28019191-28029190 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303585 5265 Fabidae View MSA
124065206 5270 Rosid View MSA
123737786 5271 Pentapetalae View MSA
122787443 5272 Eudicot View MSA
122044439 5273 Angiosperm View MSA
121346203 5274 Embryophyte View MSA
123426243 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3083 0.0 48.1644   High
cufflinks 9.11357 0.0 36.7925    
cufflinks 8.72333 0.0 40.0016    
cufflinks 10.2836 0.0 44.7457    
cufflinks 9.17126 0.0 37.6652    
cufflinks 5.75359 0.0 25.1769   Low
cufflinks 11.8488 0.0 52.8997   High
cufflinks 9.58883 0.0 42.829    
cufflinks 7.46522 0.0 38.4076    
cufflinks 0.192        
cufflinks 0.08       Low
cufflinks 0.213        
cufflinks 0.195        
cufflinks 0.239        
cufflinks 0.109       Low
cufflinks 0.218        
cufflinks 0.117        
cufflinks 0.33       High
cufflinks 0.201        
cufflinks 0.239        
cufflinks 0.092       Low
cufflinks 0.254        
cufflinks 0.213        
cufflinks 0.105       Low
cufflinks 0.23        
cufflinks 0.114        

0 Strain