Gene : Glyma.20G082000 G. max Wm82.a2.v1
Genomic Order:  820 Name:  ? Glyma.20G082000
Secondary Identifier:  ? PAC:30522330
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G082000 0.5kb upstream 0.5kb upstream 5443 true Chr20: 30852676-30858118 Glycine max
Glyma.20G082000 0.5kb upstream 0.5kb upstream 500 false Chr20: 30852676-30853175 Glycine max
Glyma.20G082000 0.5kb downstream 0.5kb downstream 5443 true Chr20: 30853176-30858618 Glycine max
Glyma.20G082000 0.5kb downstream 0.5kb downstream 500 false Chr20: 30858119-30858618 Glycine max
Glyma.20G082000 1.0kb upstream 1.0kb upstream 5943 true Chr20: 30852176-30858118 Glycine max
Glyma.20G082000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 30852176-30853175 Glycine max
Glyma.20G082000 1.0kb downstream 1.0kb downstream 5943 true Chr20: 30853176-30859118 Glycine max
Glyma.20G082000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 30858119-30859118 Glycine max
Glyma.20G082000 2.0kb upstream 2.0kb upstream 6943 true Chr20: 30851176-30858118 Glycine max
Glyma.20G082000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 30851176-30853175 Glycine max
Glyma.20G082000 2.0kb downstream 2.0kb downstream 6943 true Chr20: 30853176-30860118 Glycine max
Glyma.20G082000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 30858119-30860118 Glycine max
Glyma.20G082000 5.0kb upstream 5.0kb upstream 9943 true Chr20: 30848176-30858118 Glycine max
Glyma.20G082000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 30848176-30853175 Glycine max
Glyma.20G082000 5.0kb downstream 5.0kb downstream 9943 true Chr20: 30853176-30863118 Glycine max
Glyma.20G082000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 30858119-30863118 Glycine max
Glyma.20G082000 10.0kb upstream 10.0kb upstream 14943 true Chr20: 30843176-30858118 Glycine max
Glyma.20G082000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 30843176-30853175 Glycine max
Glyma.20G082000 10.0kb downstream 10.0kb downstream 14943 true Chr20: 30853176-30868118 Glycine max
Glyma.20G082000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 30858119-30868118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311049 5265 Fabidae View MSA
124064737 5270 Rosid View MSA
123736755 5271 Pentapetalae View MSA
122789690 5272 Eudicot View MSA
122042241 5273 Angiosperm View MSA
121345481 5274 Embryophyte View MSA
123380226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6703 0.0 48.4786    
cufflinks 11.5196 0.0 32.8426   Low
cufflinks 17.8376 0.0 48.7343    
cufflinks 12.9732 0.0 36.4831    
cufflinks 10.0373 0.0 29.2028   Low
cufflinks 25.2148 0.0 67.8255 High High
cufflinks 14.7056 0.0 41.0649    
cufflinks 23.6781 0.0 63.6753 High High
cufflinks 17.1888 0.0 47.1566    
cufflinks 1.95        
cufflinks 1.737        
cufflinks 1.955        
cufflinks 1.814        
cufflinks 1.411       Low
cufflinks 1.325       Low
cufflinks 1.9        
cufflinks 1.408       Low
cufflinks 1.981        
cufflinks 1.548        
cufflinks 1.739        
cufflinks 1.703        
cufflinks 1.68        
cufflinks 1.199       Low
cufflinks 2.342       High
cufflinks 1.827        
cufflinks 1.628        

0 Strain