Gene : Glyma.20G120300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10788:SF48 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 Genomic Order:  1203
Name:  ? Glyma.20G120300 Secondary Identifier:  ? PAC:30522838
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G120300 0.5kb upstream 0.5kb upstream 5445 true Chr20: 36306259-36311703 Glycine max
Glyma.20G120300 0.5kb upstream 0.5kb upstream 500 false Chr20: 36306259-36306758 Glycine max
Glyma.20G120300 0.5kb downstream 0.5kb downstream 5445 true Chr20: 36306759-36312203 Glycine max
Glyma.20G120300 0.5kb downstream 0.5kb downstream 500 false Chr20: 36311704-36312203 Glycine max
Glyma.20G120300 1.0kb upstream 1.0kb upstream 5945 true Chr20: 36305759-36311703 Glycine max
Glyma.20G120300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36305759-36306758 Glycine max
Glyma.20G120300 1.0kb downstream 1.0kb downstream 5945 true Chr20: 36306759-36312703 Glycine max
Glyma.20G120300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36311704-36312703 Glycine max
Glyma.20G120300 2.0kb upstream 2.0kb upstream 6945 true Chr20: 36304759-36311703 Glycine max
Glyma.20G120300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36304759-36306758 Glycine max
Glyma.20G120300 2.0kb downstream 2.0kb downstream 6945 true Chr20: 36306759-36313703 Glycine max
Glyma.20G120300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36311704-36313703 Glycine max
Glyma.20G120300 5.0kb upstream 5.0kb upstream 9945 true Chr20: 36301759-36311703 Glycine max
Glyma.20G120300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36301759-36306758 Glycine max
Glyma.20G120300 5.0kb downstream 5.0kb downstream 9945 true Chr20: 36306759-36316703 Glycine max
Glyma.20G120300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36311704-36316703 Glycine max
Glyma.20G120300 10.0kb upstream 10.0kb upstream 14945 true Chr20: 36296759-36311703 Glycine max
Glyma.20G120300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36296759-36306758 Glycine max
Glyma.20G120300 10.0kb downstream 10.0kb downstream 14945 true Chr20: 36306759-36321703 Glycine max
Glyma.20G120300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36311704-36321703 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305735 5265 Fabidae View MSA
124065335 5270 Rosid View MSA
123751102 5271 Pentapetalae View MSA
122786361 5272 Eudicot View MSA
122049755 5273 Angiosperm View MSA
121348711 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7812 0.0 32.3587    
cufflinks 13.4906 0.0 41.4056    
cufflinks 13.3195 0.0 41.439    
cufflinks 35.4092 0.0 133.809 High High
cufflinks 13.7042 0.0 41.5551    
cufflinks 8.34366 0.0 25.3783   Low
cufflinks 16.676 0.0 54.388    
cufflinks 41.5557 0.0 166.178 High High
cufflinks 20.9502 0.0 69.1895 High  
cufflinks 10.41     High High
cufflinks 0.192       Low
cufflinks 5.758        
cufflinks 5.126        
cufflinks 4.37        
cufflinks 3.342        
cufflinks 2.618        
cufflinks 4.882        
cufflinks 6.734        
cufflinks 5.895        
cufflinks 2.965        
cufflinks 0.49       Low
cufflinks 3.933        
cufflinks 4.396        
cufflinks 0.245       Low
cufflinks 2.828        
cufflinks 1.214        

0 Strain