Gene : Glyma.20G121200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  1212
Name:  ? Glyma.20G121200 Secondary Identifier:  ? PAC:30521876
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRIGLSYN-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G121200 0.5kb upstream 0.5kb upstream 7450 true Chr20: 36383581-36391030 Glycine max
Glyma.20G121200 0.5kb upstream 0.5kb upstream 500 false Chr20: 36383581-36384080 Glycine max
Glyma.20G121200 0.5kb downstream 0.5kb downstream 7450 true Chr20: 36384081-36391530 Glycine max
Glyma.20G121200 0.5kb downstream 0.5kb downstream 500 false Chr20: 36391031-36391530 Glycine max
Glyma.20G121200 1.0kb upstream 1.0kb upstream 7950 true Chr20: 36383081-36391030 Glycine max
Glyma.20G121200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36383081-36384080 Glycine max
Glyma.20G121200 1.0kb downstream 1.0kb downstream 7950 true Chr20: 36384081-36392030 Glycine max
Glyma.20G121200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36391031-36392030 Glycine max
Glyma.20G121200 2.0kb upstream 2.0kb upstream 8950 true Chr20: 36382081-36391030 Glycine max
Glyma.20G121200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36382081-36384080 Glycine max
Glyma.20G121200 2.0kb downstream 2.0kb downstream 8950 true Chr20: 36384081-36393030 Glycine max
Glyma.20G121200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36391031-36393030 Glycine max
Glyma.20G121200 5.0kb upstream 5.0kb upstream 11950 true Chr20: 36379081-36391030 Glycine max
Glyma.20G121200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36379081-36384080 Glycine max
Glyma.20G121200 5.0kb downstream 5.0kb downstream 11950 true Chr20: 36384081-36396030 Glycine max
Glyma.20G121200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36391031-36396030 Glycine max
Glyma.20G121200 10.0kb upstream 10.0kb upstream 16950 true Chr20: 36374081-36391030 Glycine max
Glyma.20G121200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36374081-36384080 Glycine max
Glyma.20G121200 10.0kb downstream 10.0kb downstream 16950 true Chr20: 36384081-36401030 Glycine max
Glyma.20G121200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36391031-36401030 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314328 5265 Fabidae View MSA
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.9412 0.0 94.1434 High  
cufflinks 8.1914 0.0 30.1606    
cufflinks 3.64223 0.0 15.9796    
cufflinks 3.24354 0.0 14.9146    
cufflinks 7.59519 0.0 26.6622    
cufflinks 37.2335 0.0 110.507 High High
cufflinks 0.581952 0.0 2.89055   Low
cufflinks 18.4305 0.0 63.3741    
cufflinks 13.5168 0.0 48.4774    
cufflinks 1.188        
cufflinks 2.236        
cufflinks 0.33       Low
cufflinks 0.535        
cufflinks 0.093       Low
cufflinks 1.306        
cufflinks 3.939        
cufflinks 2.298        
cufflinks 0.517       Low
cufflinks 1.15        
cufflinks 4.262        
cufflinks 3.402        
cufflinks 3.993        
cufflinks 2.687        
cufflinks 2.505        
cufflinks 3.617        
cufflinks 1.931        

0 Strain