Gene : Glyma.20G122500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11627:SF8 - FRUCTOSE-BISPHOSPHATE ALDOLASE 3, CHLOROPLASTIC-RELATED Genomic Order:  1225
Name:  ? Glyma.20G122500 Secondary Identifier:  ? PAC:30522082
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax CALVIN-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY66-373 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G122500 0.5kb upstream 0.5kb upstream 3276 true Chr20: 36523682-36526957 Glycine max
Glyma.20G122500 0.5kb upstream 0.5kb upstream 500 false Chr20: 36523682-36524181 Glycine max
Glyma.20G122500 0.5kb downstream 0.5kb downstream 3276 true Chr20: 36524182-36527457 Glycine max
Glyma.20G122500 0.5kb downstream 0.5kb downstream 500 false Chr20: 36526958-36527457 Glycine max
Glyma.20G122500 1.0kb upstream 1.0kb upstream 3776 true Chr20: 36523182-36526957 Glycine max
Glyma.20G122500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36523182-36524181 Glycine max
Glyma.20G122500 1.0kb downstream 1.0kb downstream 3776 true Chr20: 36524182-36527957 Glycine max
Glyma.20G122500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36526958-36527957 Glycine max
Glyma.20G122500 2.0kb upstream 2.0kb upstream 4776 true Chr20: 36522182-36526957 Glycine max
Glyma.20G122500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36522182-36524181 Glycine max
Glyma.20G122500 2.0kb downstream 2.0kb downstream 4776 true Chr20: 36524182-36528957 Glycine max
Glyma.20G122500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36526958-36528957 Glycine max
Glyma.20G122500 5.0kb upstream 5.0kb upstream 7776 true Chr20: 36519182-36526957 Glycine max
Glyma.20G122500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36519182-36524181 Glycine max
Glyma.20G122500 5.0kb downstream 5.0kb downstream 7776 true Chr20: 36524182-36531957 Glycine max
Glyma.20G122500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36526958-36531957 Glycine max
Glyma.20G122500 10.0kb upstream 10.0kb upstream 12776 true Chr20: 36514182-36526957 Glycine max
Glyma.20G122500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36514182-36524181 Glycine max
Glyma.20G122500 10.0kb downstream 10.0kb downstream 12776 true Chr20: 36524182-36536957 Glycine max
Glyma.20G122500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36526958-36536957 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303832 5265 Fabidae View MSA
124069125 5270 Rosid View MSA
123742159 5271 Pentapetalae View MSA
122788432 5272 Eudicot View MSA
122043152 5273 Angiosperm View MSA
121348633 5274 Embryophyte View MSA
123424623 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4097 0.0 41.1777   Low
cufflinks 29.6535 0.0 80.0684 High  
cufflinks 17.2417 0.0 46.0058   Low
cufflinks 49.4825 0.0 139.396 High  
cufflinks 84.1853 0.0 255.534 High High
cufflinks 81.7854 0.0 246.867 High High
cufflinks 30.4357 0.0 82.3902 High  
cufflinks 46.5616 0.0 130.636 High  
cufflinks 47.6032 0.0 133.764 High  
cufflinks 7.695     High  
cufflinks 3.562        
cufflinks 6.013        
cufflinks 29.543     High High
cufflinks 29.278     High High
cufflinks 1.329       Low
cufflinks 2.121        
cufflinks 9.287     High  
cufflinks 8.806     High  
cufflinks 8.968     High  
cufflinks 1.244       Low
cufflinks 4.423        
cufflinks 1.944        
cufflinks 2.135        
cufflinks 5.249        
cufflinks 1.405       Low
cufflinks 9.175     High  

0 Strain