Gene : Glyma.20G122600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR18934:SF146 - DEA(D/H)-BOX RNA HELICASE FAMILY PROTEIN Genomic Order:  1226
Name:  ? Glyma.20G122600 Secondary Identifier:  ? PAC:30520818
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G122600 0.5kb upstream 0.5kb upstream 19034 true Chr20: 36527607-36546640 Glycine max
Glyma.20G122600 0.5kb upstream 0.5kb upstream 500 false Chr20: 36546141-36546640 Glycine max
Glyma.20G122600 0.5kb downstream 0.5kb downstream 19034 true Chr20: 36527107-36546140 Glycine max
Glyma.20G122600 0.5kb downstream 0.5kb downstream 500 false Chr20: 36527107-36527606 Glycine max
Glyma.20G122600 1.0kb upstream 1.0kb upstream 19534 true Chr20: 36527607-36547140 Glycine max
Glyma.20G122600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36546141-36547140 Glycine max
Glyma.20G122600 1.0kb downstream 1.0kb downstream 19534 true Chr20: 36526607-36546140 Glycine max
Glyma.20G122600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36526607-36527606 Glycine max
Glyma.20G122600 2.0kb upstream 2.0kb upstream 20534 true Chr20: 36527607-36548140 Glycine max
Glyma.20G122600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36546141-36548140 Glycine max
Glyma.20G122600 2.0kb downstream 2.0kb downstream 20534 true Chr20: 36525607-36546140 Glycine max
Glyma.20G122600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36525607-36527606 Glycine max
Glyma.20G122600 5.0kb upstream 5.0kb upstream 23534 true Chr20: 36527607-36551140 Glycine max
Glyma.20G122600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36546141-36551140 Glycine max
Glyma.20G122600 5.0kb downstream 5.0kb downstream 23534 true Chr20: 36522607-36546140 Glycine max
Glyma.20G122600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36522607-36527606 Glycine max
Glyma.20G122600 10.0kb upstream 10.0kb upstream 28534 true Chr20: 36527607-36556140 Glycine max
Glyma.20G122600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36546141-36556140 Glycine max
Glyma.20G122600 10.0kb downstream 10.0kb downstream 28534 true Chr20: 36517607-36546140 Glycine max
Glyma.20G122600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36517607-36527606 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301521 5265 Fabidae View MSA
124071978 5270 Rosid View MSA
123740465 5271 Pentapetalae View MSA
122787774 5272 Eudicot View MSA
122043243 5273 Angiosperm View MSA
121347422 5274 Embryophyte View MSA
123427408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.80018 0.0 30.6089   High
cufflinks 6.19447 0.0 29.7634    
cufflinks 7.58391 0.0 35.7767    
cufflinks 4.45817 0.0 16.0161    
cufflinks 3.68495 0.0 13.6885    
cufflinks 3.19587 0.0 10.2667   Low
cufflinks 11.8613 0.0 42.2739   High
cufflinks 3.65408 0.0 13.411    
cufflinks 5.27711 0.0 18.6805    
cufflinks 0.414        
cufflinks 0.099       Low
cufflinks 0.933        
cufflinks 0.447        
cufflinks 0.288        
cufflinks 0.412        
cufflinks 0.834        
cufflinks 0.395        
cufflinks 1.023        
cufflinks 0.796        
cufflinks 1.051       High
cufflinks 0.151       Low
cufflinks 1.024        
cufflinks 1.018        
cufflinks 0.128       Low
cufflinks 0.912        
cufflinks 0.384        

0 Strain