Gene : Glyma.20G123200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15492:SF1 - CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  1232
Name:  ? Glyma.20G123200 Secondary Identifier:  ? PAC:30520712
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G123200 0.5kb upstream 0.5kb upstream 3359 true Chr20: 36597149-36600507 Glycine max
Glyma.20G123200 0.5kb upstream 0.5kb upstream 500 false Chr20: 36600008-36600507 Glycine max
Glyma.20G123200 0.5kb downstream 0.5kb downstream 3359 true Chr20: 36596649-36600007 Glycine max
Glyma.20G123200 0.5kb downstream 0.5kb downstream 500 false Chr20: 36596649-36597148 Glycine max
Glyma.20G123200 1.0kb upstream 1.0kb upstream 3859 true Chr20: 36597149-36601007 Glycine max
Glyma.20G123200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 36600008-36601007 Glycine max
Glyma.20G123200 1.0kb downstream 1.0kb downstream 3859 true Chr20: 36596149-36600007 Glycine max
Glyma.20G123200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 36596149-36597148 Glycine max
Glyma.20G123200 2.0kb upstream 2.0kb upstream 4859 true Chr20: 36597149-36602007 Glycine max
Glyma.20G123200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 36600008-36602007 Glycine max
Glyma.20G123200 2.0kb downstream 2.0kb downstream 4859 true Chr20: 36595149-36600007 Glycine max
Glyma.20G123200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 36595149-36597148 Glycine max
Glyma.20G123200 5.0kb upstream 5.0kb upstream 7859 true Chr20: 36597149-36605007 Glycine max
Glyma.20G123200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 36600008-36605007 Glycine max
Glyma.20G123200 5.0kb downstream 5.0kb downstream 7859 true Chr20: 36592149-36600007 Glycine max
Glyma.20G123200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 36592149-36597148 Glycine max
Glyma.20G123200 10.0kb upstream 10.0kb upstream 12859 true Chr20: 36597149-36610007 Glycine max
Glyma.20G123200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 36600008-36610007 Glycine max
Glyma.20G123200 10.0kb downstream 10.0kb downstream 12859 true Chr20: 36587149-36600007 Glycine max
Glyma.20G123200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 36587149-36597148 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307481 5265 Fabidae View MSA
124062519 5270 Rosid View MSA
123740385 5271 Pentapetalae View MSA
122788529 5272 Eudicot View MSA
122041727 5273 Angiosperm View MSA
121346994 5274 Embryophyte View MSA
123425280 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8083 0.0 77.0073 High  
cufflinks 16.6286 0.0 56.7842    
cufflinks 14.7309 0.0 50.6187    
cufflinks 16.004 0.0 54.5317    
cufflinks 22.6489 0.0 76.3732 High  
cufflinks 11.2531 0.0 40.1341   Low
cufflinks 29.5077 0.0 100.373 High High
cufflinks 14.7985 0.0 50.9588    
cufflinks 23.7123 0.0 79.8719 High  
cufflinks 2.476       Low
cufflinks 2.386       Low
cufflinks 4.867       High
cufflinks 3.0        
cufflinks 4.411        
cufflinks 4.938       High
cufflinks 3.639        
cufflinks 3.061        
cufflinks 4.839       High
cufflinks 3.795        
cufflinks 4.231        
cufflinks 2.449       Low
cufflinks 4.377        
cufflinks 3.143        
cufflinks 2.721       Low
cufflinks 4.0        
cufflinks 3.229        

0 Strain