Gene : Glyma.20G113600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF135 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  1136
Name:  ? Glyma.20G113600 Secondary Identifier:  ? PAC:30519760
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G113600 0.5kb upstream 0.5kb upstream 5203 true Chr20: 35557320-35562522 Glycine max
Glyma.20G113600 0.5kb upstream 0.5kb upstream 500 false Chr20: 35557320-35557819 Glycine max
Glyma.20G113600 0.5kb downstream 0.5kb downstream 5203 true Chr20: 35557820-35563022 Glycine max
Glyma.20G113600 0.5kb downstream 0.5kb downstream 500 false Chr20: 35562523-35563022 Glycine max
Glyma.20G113600 1.0kb upstream 1.0kb upstream 5703 true Chr20: 35556820-35562522 Glycine max
Glyma.20G113600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35556820-35557819 Glycine max
Glyma.20G113600 1.0kb downstream 1.0kb downstream 5703 true Chr20: 35557820-35563522 Glycine max
Glyma.20G113600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35562523-35563522 Glycine max
Glyma.20G113600 2.0kb upstream 2.0kb upstream 6703 true Chr20: 35555820-35562522 Glycine max
Glyma.20G113600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35555820-35557819 Glycine max
Glyma.20G113600 2.0kb downstream 2.0kb downstream 6703 true Chr20: 35557820-35564522 Glycine max
Glyma.20G113600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35562523-35564522 Glycine max
Glyma.20G113600 5.0kb upstream 5.0kb upstream 9703 true Chr20: 35552820-35562522 Glycine max
Glyma.20G113600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35552820-35557819 Glycine max
Glyma.20G113600 5.0kb downstream 5.0kb downstream 9703 true Chr20: 35557820-35567522 Glycine max
Glyma.20G113600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35562523-35567522 Glycine max
Glyma.20G113600 10.0kb upstream 10.0kb upstream 14703 true Chr20: 35547820-35562522 Glycine max
Glyma.20G113600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35547820-35557819 Glycine max
Glyma.20G113600 10.0kb downstream 10.0kb downstream 14703 true Chr20: 35557820-35572522 Glycine max
Glyma.20G113600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35562523-35572522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310454 5265 Fabidae View MSA
124070852 5270 Rosid View MSA
123737642 5271 Pentapetalae View MSA
122795655 5272 Eudicot View MSA
122048650 5273 Angiosperm View MSA
121349382 5274 Embryophyte View MSA
123426504 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.165569 0.0 1.12511 Low  
cufflinks 0.255415 0.0 1.09637    
cufflinks 0.078614 0.0 0.806389 Low Low
cufflinks 0.2433 0.0 1.45531    
cufflinks 0.223289 0.0 1.16935 Low  
cufflinks 0.072042 0.0 0.379881 Low Low
cufflinks 2.5859 0.0 8.22159   High
cufflinks 0.219539 0.0 1.44851 Low  
cufflinks 0.242225 0.0 1.57186 Low  
cufflinks 0.063     Low  
cufflinks 0.049     Low  
cufflinks 0.069     Low  
cufflinks 0.337       High
cufflinks 0.186        
cufflinks 0.02     Low Low
cufflinks 0.102        
cufflinks 0.063     Low  
cufflinks 0.191        
cufflinks 0.515       High
cufflinks 0.105        
cufflinks 0.074        
cufflinks 0.183        
cufflinks 0.082     Low  
cufflinks 0.043     Low Low
cufflinks 0.085     Low  
cufflinks 0.104        

0 Strain