Gene : Glyma.20G115500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31561:SF5 - 3-KETOACYL-COA SYNTHASE 5-RELATED Genomic Order:  1155
Name:  ? Glyma.20G115500 Secondary Identifier:  ? PAC:30522360
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5080 Glycine max pathologic  
Gmax PWY-6433 Glycine max pathologic  
Gmax PWY-6598 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-7601 Glycine max pathologic  
Gmax PWY-7619 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G115500 0.5kb upstream 0.5kb upstream 3078 true Chr20: 35731977-35735054 Glycine max
Glyma.20G115500 0.5kb upstream 0.5kb upstream 500 false Chr20: 35731977-35732476 Glycine max
Glyma.20G115500 0.5kb downstream 0.5kb downstream 3078 true Chr20: 35732477-35735554 Glycine max
Glyma.20G115500 0.5kb downstream 0.5kb downstream 500 false Chr20: 35735055-35735554 Glycine max
Glyma.20G115500 1.0kb upstream 1.0kb upstream 3578 true Chr20: 35731477-35735054 Glycine max
Glyma.20G115500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 35731477-35732476 Glycine max
Glyma.20G115500 1.0kb downstream 1.0kb downstream 3578 true Chr20: 35732477-35736054 Glycine max
Glyma.20G115500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 35735055-35736054 Glycine max
Glyma.20G115500 2.0kb upstream 2.0kb upstream 4578 true Chr20: 35730477-35735054 Glycine max
Glyma.20G115500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 35730477-35732476 Glycine max
Glyma.20G115500 2.0kb downstream 2.0kb downstream 4578 true Chr20: 35732477-35737054 Glycine max
Glyma.20G115500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 35735055-35737054 Glycine max
Glyma.20G115500 5.0kb upstream 5.0kb upstream 7578 true Chr20: 35727477-35735054 Glycine max
Glyma.20G115500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 35727477-35732476 Glycine max
Glyma.20G115500 5.0kb downstream 5.0kb downstream 7578 true Chr20: 35732477-35740054 Glycine max
Glyma.20G115500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 35735055-35740054 Glycine max
Glyma.20G115500 10.0kb upstream 10.0kb upstream 12578 true Chr20: 35722477-35735054 Glycine max
Glyma.20G115500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 35722477-35732476 Glycine max
Glyma.20G115500 10.0kb downstream 10.0kb downstream 12578 true Chr20: 35732477-35745054 Glycine max
Glyma.20G115500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 35735055-35745054 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308026 5265 Fabidae View MSA
124074382 5270 Rosid View MSA
123744253 5271 Pentapetalae View MSA
122788881 5272 Eudicot View MSA
122042493 5273 Angiosperm View MSA
121309978 5274 Embryophyte View MSA
123347592 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.6217 0.0 49.9198    
cufflinks 51.7569 0.0 152.111 High High
cufflinks 23.7929 0.0 64.5411 High  
cufflinks 25.1549 0.0 68.4573 High  
cufflinks 1.24447 0.0 4.1944    
cufflinks 9.91882 0.0 26.5964    
cufflinks 0.968145 0.0 3.35551    
cufflinks 15.4425 0.0 41.2411    
cufflinks 0.100904 0.0 0.395183 Low Low
cufflinks 11.086     High  
cufflinks 0.022     Low Low
cufflinks 15.733     High  
cufflinks 0.169        
cufflinks 0.066     Low  
cufflinks 0.007     Low Low
cufflinks 66.92     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.161     High  
cufflinks 57.267     High  
cufflinks 65.036     High  
cufflinks 0.023     Low Low
cufflinks 55.946     High  
cufflinks 70.833     High  
cufflinks 0.007     Low Low
cufflinks 51.651     High  
cufflinks 0.006     Low Low

0 Strain